Roseobacter denitrificans: RD1_1359
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Entry
RD1_1359 CDS
T00376
Symbol
spoT
Name
(GenBank) guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00230
Purine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RD1_1359 (spoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_1359 (spoT)
Enzymes [BR:
rde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
RD1_1359 (spoT)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
RD1_1359 (spoT)
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
Other maturation factors
RD1_1359 (spoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
RelA_AH_RIS
TGS
ACT_4
HD
ACT_AHAS_ss
Motif
Other DBs
NCBI-ProteinID:
ABG31001
RoseoBase:
RD1_1359
UniProt:
Q16AJ2
LinkDB
All DBs
Position
1307760..1309916
Genome browser
AA seq
718 aa
AA seq
DB search
MKDGDHLEISADDLVSLVLRYNPKTNQKLIRAAYDYGREMHADQLRHSGELYFNHPVAVA
AILTEQNLDDATLITALLHDTIEDTPASYSEVAARFGDEIAELVDGVTKLTNLQLNSSQT
KQAENFRKLFMAMSKDLRVILVKLSDRLHNMRTIRAMKPEKQAQKARETMDIYAPLAGRM
GMQWMREELEDLAFRVLNPEGRASIIRRFINLQKETGDVIQRITGDMRLELDKAGVQAEV
FGRAKKPYSIWRKMQEKDQSFARLSDIYGFRIITDSEEDCYRALGAIHQRWRAVPGRFKD
YISQPKSNGYRSIHTTVSGRDGKRVEVQIRTVQMHDVAETGVAAHWSYRDGVRSNNPFAV
DPAKWISTLTEQFDAEEDHEDFLEAVKLEMYSDQVFCFTPKGEVVKLPRGATPIDFAFAI
HTRIGMACVGAKVDHMRVPLWTRLKNGQSVEVITAEGQSPQATWLDIAVTGKARSAIRRA
LREEDRARFVKLGQELARSAFEHVGRKATDKALEAAARNMRCNDRIDLLARLGSAEITGR
DVVQAVYPELVPREGVKVDAKRAVIGLSPGQSFERAFCCQPLPGERIVGITFKGRGVVVH
AIDCDRMSVYEDQPDRWLDLRWHEGAHPAVYGATIELTLNNDAGTLGRICTLIGETRANI
SDLQFVDRKPDYFLLLIYVELRDVAHLHSLMLTLEAESDVASVSRYRNMAHDKTETPA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacggcgatcatttggaaatatccgccgatgacctcgtgtcgctcgttctgcgc
tacaatccgaaaaccaaccagaagttgatccgcgcggcctatgactatggccgcgagatg
catgcggatcaactgcgccattcgggtgagctgtatttcaatcacccggtggccgtagcg
gcaatcctgaccgaacagaacctggatgatgcaacgctgatcacggcgctgctgcatgac
acgatcgaggacaccccagcctcctattccgaggtcgccgcgcgctttggcgacgagatc
gcagagcttgtcgatggtgtgaccaagctgaccaatctgcaactcaactcgtcacagacc
aaacaggccgagaattttcgcaagctgttcatggccatgtcgaaagacctgcgggtcatt
ctggtcaagctgtcggaccggttgcacaacatgcgcaccatccgcgcgatgaagccagaa
aagcaggcgcagaaggcacgcgaaacaatggatatctatgcgccgttggcggggcgtatg
gggatgcagtggatgcgcgaagaactcgaagatctcgcgttccgggttctcaatccggag
gggcgcgcgtccattattcgccgcttcatcaacctgcagaaggaaacgggcgacgtcatt
cagcgcatcacaggtgacatgcggctggaactggacaaggccggagtgcaggccgaagtc
ttcggtcgcgccaagaagccttattcgatctggcgcaagatgcaggaaaaggaccagtcc
tttgcacggctttcggatatctacggctttcgcatcatcacggacagcgaagaagactgt
taccgggcactgggcgccatccatcagcggtggcgggcggtgccggggcggttcaaggac
tacatcagccagccgaaaagtaacggataccggtcgatccatacaaccgtttccgggcgt
gacggcaagcgggtcgaggtccagatcagaaccgtccagatgcatgatgtggccgaaacc
ggcgttgcggcgcattggtcctatcgggacggtgtgcgcagcaacaatccctttgctgtt
gatcctgcaaaatggatcagcaccctgaccgaacagttcgacgccgaggaagatcacgag
gacttcctcgaagcggtcaagcttgagatgtattcggatcaggttttctgtttcacgccc
aagggggaggtcgtaaagctgccgcgcggggccacgccgatcgacttcgcctttgcgatc
catacgcgcatcggcatggcctgtgtgggggccaaggttgaccacatgcgcgtaccgctc
tggacgcggctgaaaaacggccagtcggtggaggtgatcacggcggagggtcaaagcccg
caggccacatggcttgacatcgccgtcaccggcaaggcgcgatctgctatccggcgtgcg
ctgcgcgaggaagaccgggcccgctttgtcaaactggggcaggaactggcgcgctccgcg
ttcgagcatgtggggcgtaaggcgaccgacaaggcgcttgaggcggctgcgcgcaacatg
cggtgcaatgatcgcattgatctgcttgcccgcctgggcagcgccgagatcaccggccgc
gatgtcgtgcaggcagtctatcccgaacttgtgccgagggaaggcgtgaaagtggatgcg
aagcgcgcggtgatcggtctgtcgcccgggcagtcgttcgaacgcgccttttgctgtcag
cccctgccgggcgagcggattgtcgggatcaccttcaaggggcgcggagtggtggtgcat
gcgatcgattgcgaccgcatgagcgtttacgaagatcaaccggaccggtggctcgatttg
cgctggcacgaaggcgcgcaccctgcggtttacggcgcgacgattgagcttaccctgaac
aacgatgcagggacactgggacgaatttgcacattgatcggggaaacccgagcgaatatt
tcagatttacaatttgtcgacagaaagcctgattatttcctgttgttgatctatgtggaa
ctgcgggatgtggcgcatctgcattccttgatgctgacgcttgaagcggaaagtgatgtg
gcctctgtatcgcggtatagaaatatggcgcatgataagacggaaacacctgcctga
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