Roseobacter denitrificans: RD1_1380
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Entry
RD1_1380 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rde03019
]
RD1_1380
Messenger RNA biogenesis [BR:
rde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RD1_1380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
AAA_22
Rad17
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABG31021
RoseoBase:
RD1_1380
UniProt:
Q16AH2
LinkDB
All DBs
Position
1326307..1327194
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AA seq
295 aa
AA seq
DB search
MTDTSTTARRIVFVTGPSGAGRSSALNVLEDAGFEVVDNLPLRLLDAFLDVPSSAQPLAL
GIDPRNRDFSTTVIVDALGKLTGIPGLAPELLYLDCSTEVLLRRFSETRRRHPLAPVDRP
SEGIVRELEMLGPLKARADVLIDTTHLNVHELRAEVEHWFAPGGKRRLSVSVQSFSYKRG
LPRSVDMVFDCRFLTNPYWVPELRSLNGTHDLVKKYVTADARFEQFARKVDDLSLLLLPA
YRDEGKSYLSIAFGCTGGQHRSVVMAQCHALRLAEEGWQVSIRHRELDLRKNEET
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacatcaaccaccgcacgtcgcattgtatttgtcaccggaccgtcgggggcg
gggcgttcaagtgccctcaacgtgctcgaagatgcgggtttcgaagtcgtggacaacctg
cccctgcggctgctggatgcgttcctcgatgtcccctccagcgcccaaccgctggccctg
ggaattgatccgcgcaacagagatttttcaacaaccgtgatcgtggatgcgttggggaaa
ttgacgggtatccccggtctcgcaccggaactgttgtatcttgattgctcgaccgaggtg
ctgttgcgtcggttttcggaaacacggcgtcgccacccgcttgcaccggttgatcgcccg
tccgaaggcatagtgcgcgagttggagatgctcggccccctgaaggcgcgggccgatgtg
ctgatcgacacgacgcatctgaatgtgcatgagttgcgcgctgaagtggaacactggttt
gccccgggtggaaagcggcggctgagtgtttcggtgcagtctttttcctacaaacgcgga
ttgccgcgcagcgttgatatggtgtttgattgccgttttctgaccaacccatactgggtg
cccgaattgcgcagtttgaatgggacgcatgatttggtcaaaaagtacgtgaccgctgac
gcccgttttgagcagtttgcccgaaaggtggatgatctgagccttttgctactgcctgct
tatcgcgatgagggaaagtcatatctttcaatcgcctttgggtgtacgggcggccaacat
cgctcagttgtgatggcccaatgccatgctttgcgccttgcagaagaaggctggcaggtg
tcaattagacaccgtgagcttgatttgcgcaaaaatgaagagacctga
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