KEGG   Roseobacter denitrificans: RD1_1393
Entry
RD1_1393          CDS       T00376                                 
Symbol
parC
Name
(GenBank) DNA topoisomerase IV, A subunit
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rde03032]
    RD1_1393 (parC)
   03036 Chromosome and associated proteins [BR:rde03036]
    RD1_1393 (parC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rde02048]
    RD1_1393 (parC)
Enzymes [BR:rde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RD1_1393 (parC)
DNA replication proteins [BR:rde03032]
 Prokaryotic type
  DNA Topoisomerases
   RD1_1393 (parC)
Chromosome and associated proteins [BR:rde03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RD1_1393 (parC)
Prokaryotic defense system [BR:rde02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RD1_1393 (parC)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Prot_ATP_ID_OB_C
Other DBs
NCBI-ProteinID: ABG31033
RoseoBase: RD1_1393
UniProt: Q16AG0
LinkDB
Position
1335179..1337476
AA seq 765 aa
MNDVSDTKPVDLSEPLRRALGERYLTYALSTIMHRALPDARDGLKPVHRRILYAMRELRL
SSTGGFRKSAKISGDVMGNYHPHGDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNP
AASRYTEARMTAVAEAMLEGLNENAVDFRENYDGTLTEPVVLPAQFPNLLANGSSGIAVG
MATNIPPHNIAELCDACIHLIKTPDARDDTLLKYVPGPDFPTGGVIVEPPENIAQAYRTG
KGGFRLRCRWEVEDLGRGQWQIVVTEIPYQVQKSKLIEKIAELIQTKKIPILADVRDESA
DDIRMIIEPRSRSVDPDVLMGMLFRNCDLEVRFSLNMNVLIDGVTPKVCSMKEVLQAFLD
HRQEVLQRRSTHRLEKIDHRLEVLEGFIIAFLNLDRVIDIIRYDDDPKAALMAEDWGRDH
PRALNEADYVPPVSTDDVTLTEVQAEAILNMRLRSLRRLEEMELVREQEALMEERAGLED
LLENPGLQWASITEQLRATKKQFGKDWDGGARRTTFSEAAVIEDVPIEAMIDREPITVVC
SQMGWVRAMTGHIDLGRELKFKDGDGPRFIFHAETTDRLLVFGSNGRFYTVSASSLPGGR
GMGEPLRLMIDLPNEAEIVTILTHAPDRKLLVASSAGDGFVVPEADVVAQTRTGKQVLNV
RGDTRAMICKPVNGDTVAVVGENRKVLVFPLEDLPEMGRGKGVRLQKYKDGGLSDATTFM
RAEGLSWLDPAGRTRSETDLAEWTGKRATAGRMAPRGFPRDNKFT
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgaacgatgtcagcgacacaaaaccggtagacctttccgaaccattgcgccgcgcgctt
ggcgagcggtatctgacctatgcgctgagcacgatcatgcatcgtgcgctgcccgatgcg
cgtgatggtctcaagcccgtgcatcgccggatcctgtatgcgatgcgcgaattgcgcttg
tcttctaccggcggtttccgcaagtccgccaagatttcgggcgacgtgatgggcaactat
cacccgcatggggacgccgcgatttacgacgcgatggcccgcctcgcgcaggatttcaac
gtccgctatccgctggtcgacgggcaggggaattttggcaatatcgacggcgataacccc
gccgccagccgctacaccgaagcgcgcatgaccgccgttgccgaggcgatgctggaaggg
ctgaacgagaatgcggtcgattttcgtgagaactacgacggcacgctgaccgagccggtg
gttttgcccgcgcagttcccgaatttgctggcgaacgggtccagcggcatcgccgtgggg
atggccaccaacatcccgccccacaacatcgccgaactgtgtgacgcctgtattcacctc
atcaaaacgcccgatgcgcgcgatgacaccttgttgaaatatgtgcccggaccggacttc
ccgaccggtggtgtgatcgtggagccgccggaaaacatcgcgcaggcctatcgtacgggc
aagggcgggtttcgtctgcgctgccgttgggaggtggaggacctgggccggggtcaatgg
cagatcgtggtcaccgaaatcccctatcaggtgcagaaatccaagctgatcgaaaagatc
gcggagcttattcagaccaagaaaatcccgatcctcgcggatgtgcgtgacgaatccgcc
gatgacatccggatgatcattgagccgcgttcccggtcggttgatccggatgtgctgatg
gggatgttgtttcgcaactgcgatcttgaggtgcggttttcgctgaacatgaacgtgctg
attgacggcgtgacgcccaaggtttgttcgatgaaagaggtgttgcaggccttccttgat
catcggcaggaagtcttgcagcggcgctcaacgcatcgtctggaaaagatcgaccaccgt
cttgaggtgcttgaagggttcatcatcgcctttctgaaccttgatcgcgtgattgacatc
atccgctatgatgacgatcccaaggcggctttgatggccgaggattggggccgcgatcac
ccgcgtgctctcaatgaggcggattatgtaccgccagtgtcgacggatgatgtgacgctg
accgaggtgcaggccgaggccattttgaatatgcggttgcggtctttgcgccgtcttgag
gaaatggaactggtgcgtgagcaggaggccctgatggaagagcgcgccgggctggaggac
cttttggaaaatcccggtctgcaatgggccagcatcaccgagcaattgcgcgcgaccaag
aaacagttcggcaaggactgggacggcggtgcgcgccgcaccacattctccgaggctgcg
gtgatcgaagacgtgcccatcgaggcgatgatcgaccgcgagccgatcacggtcgtttgc
tcgcaaatgggatgggtgcgcgcaatgacgggccacatcgacctcgggcgggagttgaaa
ttcaaggatggcgacgggccgcgctttatcttccatgcggaaaccacggatcgtttgctg
gtgtttggatcgaacgggcggttttatacggtctccgcctccagcctgccgggcggtcgg
ggcatgggagagccgctgcgcttgatgattgatctgcccaatgaggcggaaatcgtcaca
attcttacccatgcgcctgatcgcaagctgttggtcgcgtcctccgcgggtgatggtttt
gtcgtgcccgaagcagatgtcgtggcccagacccggacgggcaaacaggtgctgaacgtg
cgcggcgatacgcgtgcgatgatctgcaaaccggtgaatggggatacagtggccgtcgtc
ggtgaaaaccgcaaggttctggtcttcccgcttgaggatctgcctgaaatgggccggggc
aaaggtgtccgtttgcaaaagtacaaagacggcgggctgtccgatgcgacgaccttcatg
cgcgcggaagggctcagctggctggacccggcagggcgtacccgcagcgaaacggacctc
gccgaatggacgggaaaacgcgccacggcgggccggatggcgccgcgcggtttcccgcgc
gacaacaagttcacctag

DBGET integrated database retrieval system