Roseobacter denitrificans: RD1_1476
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Entry
RD1_1476 CDS
T00376
Name
(GenBank) TrapT family, DctM subunit, putative
KO
K11690
TRAP-type transport system large permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_1476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1476
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_1476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABG31109
RoseoBase:
RD1_1476
UniProt:
Q16A84
LinkDB
All DBs
Position
complement(1400878..1402194)
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AA seq
438 aa
AA seq
DB search
MDPILLGGIVALATILVLFSGVSVALGLLIVSTGFLLIFDGLRSLELIPEILFGKLDNFA
LLAIPMFIIMGSSIASTRAGADLYEALERWLTRVPGGLVISNLGACALFSAMSGSSPATC
AAIGKMGIPEMRKRGYPDGVAAGSIAAGGTLGILIPPSVTMIVYGIATETSIGRLFLAGV
IPGLLLVGLFMAWSLYSTWKSGDQMLLASRVYSWKEKFEILPRVLPFLAIIVGVLYAMYG
GIATPSETAAVGALLCLLIAIIIYKLWNPKDLWVVLRDSTKESVMIMFIIAAAGVFSYML
SSLFITQAIAEWIGTLDVNRWVLMGFVMLFLLVAGFFLPPVAVILMAAPILLPIITTAGF
DPIWFAVVLTINMEIGLISPPVGLNLYVINGIAPDISLKTILKGSLPFVACMVIAIILLC
FFPGIATWLPDVIMGEAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacccgatcctgctcggcggcattgtcgcactcgccactattctcgtgctgttttcc
ggggtgtcggtggcccttgggctgctgattgtatccaccggcttcttgctgatcttcgat
gggctgcgctcgcttgaactgatccctgaaattctgtttggcaagcttgacaattttgcc
ctgctggcgatcccgatgttcatcatcatgggctcttccatcgcatcgacgcgggcgggg
gctgacctttatgaggcgcttgaacgctggctgacccgcgtgccgggcgggctggtgatt
tccaacctcggggcctgcgcgctcttttcggccatgtcgggatcaagccctgcgacctgt
gctgccatcggcaagatgggcatccccgagatgcgcaaacgcggctatcccgacggggtc
gcggcggggtccatcgcggccgggggaacactcggtattctaatcccgccgtcagtcacg
atgattgtctacggcatcgcgaccgaaacctcgattggtcgtttgtttctggccggcgtg
atcccggggcttttgctagtgggccttttcatggcgtggtcgctgtattccacatggaaa
agcggcgaccagatgctgctggcgtcgcgcgtctacagttggaaggaaaagtttgaaatc
ctgccgcgcgtcctgccgttcctcgccatcatcgtgggcgttctctatgccatgtatggc
ggcatcgcgacaccgtccgagacggccgccgtcggtgcattgctctgtctgttgatcgcg
atcatcatttacaaactgtggaaccccaaagacctgtgggtggtgctgcgcgacagtacc
aaggaaagcgtgatgatcatgttcatcatcgcagccgccggtgtcttttcctacatgctt
tcaagcctcttcatcacgcaagccatcgcggaatggatcgggacactggatgtaaaccgc
tgggttctcatgggttttgtgatgctgttcctgctggtggccgggttcttcctgccgccg
gtggcggtgatcctgatggccgcaccgatcctgcttccaatcattaccacggctggtttt
gatcccatctggtttgcggtggttctgaccatcaatatggagatcggattgatatcgccg
cccgtgggtctgaacctctatgtgatcaacggcatcgcgccggatatttcgctcaagacg
atcctcaaggggtccctgcccttcgtggcctgcatggtcattgcgatcattctgctgtgc
ttctttccgggcatcgcgacatggctgcctgatgtgatcatgggtgaggccgtatga
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