Roseobacter denitrificans: RD1_1542
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Entry
RD1_1542 CDS
T00376
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_1542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1542
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABG31172
RoseoBase:
RD1_1542
UniProt:
Q16A21
LinkDB
All DBs
Position
1464126..1465388
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AA seq
420 aa
AA seq
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MTGAAFFVLLVIGVPIGIVLSLAAVVFILWTGNGLLLNSYGLQMFSALNNFGLLAIPLFI
LIGELMNGAGITQRLVRLAATFIGAVRGGLAYINLIANMMVASILGSATAQIAMMSQVMV
PEMEKEGYKREFATAVTAFGGLLGPIIPPSIVFVVYAVLAQVAVRDMLVAGILPGLILTA
LFIGTIAFLGIWHSYPRGQKVTWPDRWVAVRKALPMLSIPAVIIGTIMGGFGSPTEAAAL
GALCAALLGFITRTLKLSDLPKILLRTGINSALVLFLVAAAGVFSWVLVFGQVPQAAAAW
IETVATSPAGFMLLVLVMLLLVGTVIDGIPGLIMVVPILLPIATEVYGIHPVHFGVVVSI
NLILGLLSPPVGIGLYVAASVARVSPLKVFRVAVPFFIVTCCVLVLLALVPSISLFFLEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgactggagccgccttttttgtcctgctggtcatcggcgtgcccatcggcatcgtgttg
tcgcttgcggcggtcgtgttcattctatggacgggcaacggcctgcttttgaacagctac
ggcttgcaaatgttcagcgcgctgaacaactttggtctcttggcgatcccgctcttcatt
ctgatcggagagttgatgaacggggcgggtattacccaacgccttgtccggctggccgcg
acctttattggtgcggtccggggcgggctggcctatatcaacctgattgccaatatgatg
gtggcctcgatcctcgggtcggccacggcgcagatcgcgatgatgtcgcaggtcatggtg
cccgaaatggaaaaggaaggctacaaacgcgaatttgccaccgcggtcaccgcctttggt
ggattgctggggccgatcatcccgccgtccatcgtctttgtggtttatgcggtgctcgcg
caggtggcggtgcgcgatatgttggtcgcaggcatccttccgggtttgatcctgacggcc
ctgtttattggcacgattgcctttctgggcatctggcacagctatccgagggggcaaaag
gtcacttggcccgaccggtgggtggcggtgcgcaaggccttgccgatgctgtcgatcccc
gccgtgatcatcggcaccattatgggcggtttcggttcccccaccgaggcggcagcactt
ggcgcgctgtgtgcggcgctgctgggtttcatcacccggacgctgaagctgtcggacctg
cccaagatcctgctgcgcacgggcatcaattcggcgctggtgctgtttctggtggcggcg
gcaggggtgttttcatgggttctggtgttcgggcaggtgccacaggcggcagcggcgtgg
atagaaaccgtggccacgtcgcctgcgggtttcatgttgctggtgctggtcatgctgctg
ctggtcggtacggtgatcgacgggatacccgggctgatcatggtggtgcccatcctgctg
cccatcgcgaccgaagtctatggcatccatccagtgcatttcggggtcgtggtgtcgatc
aacctgatactggggcttttatcgcccccggtggggatcggtctttatgtggctgcctcc
gtggcgcgggtcagtccgctcaaggtcttccgcgtggccgtgccctttttcatcgtaacc
tgctgcgtcctggtcctgttggcgctggttccttcgatcagcctgttctttctcgaactc
tag
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