Roseobacter denitrificans: RD1_1570
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Entry
RD1_1570 CDS
T00376
Symbol
nirG
Name
(GenBank) nitrite reductase heme biosynthesis G
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_1570 (nirG)
Enzymes [BR:
rde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
RD1_1570 (nirG)
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Gene cluster
GFIT
Motif
Pfam:
NirdL-like_HTH
AsnC_trans_reg2
HTH_AsnC-type
HTH_24
wHTH-HSP90_Na-assoc
DUF2110_C
Motif
Other DBs
NCBI-ProteinID:
ABG31198
RoseoBase:
RD1_1570
UniProt:
Q169Z5
LinkDB
All DBs
Position
1493111..1493560
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AA seq
149 aa
AA seq
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MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLD
AAAMGGAFCLCAMEVPPAQFEAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITET
AARIEAATGLPVFQFPKLKEFFVGFRVAA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgacgataccgatcggcagatcatcaacgcgctgcaaaccgggtttccgatt
gcgccccgcccctttgcgctggccgctgagcgtctcggactggccgagggcgatctgatc
gcacggctggcccgcatgaaagacgcaggcatcatcacgcgtttcggcccgtttctggac
gcagcagccatgggcggtgccttttgcctgtgtgccatggaagtcccgcctgcgcagttc
gaggcgatgacccgcaccgtcaacagtttcgatgaagtggcgcataattatgcgcgcgat
caccgtctgaacatgtggttcgtgctggccaccgagactcccgcggggatcaccgagacc
gccgcgcgcatcgaggcggcaaccggcctgccggtgttccagtttcccaaactcaaggaa
ttcttcgtgggcttccgggtggcggcatga
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