Roseobacter denitrificans: RD1_1571
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Entry
RD1_1571 CDS
T00376
Symbol
nirH
Name
(GenBank) nitrite reductase heme biosynthesis H protein, putative
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_1571 (nirH)
Enzymes [BR:
rde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
RD1_1571 (nirH)
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Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_20
HTH_AsnC-type
Coatomer_g_Cpla
MarR_2
Myb_DNA-binding_7
Phage_DsbA
Motif
Other DBs
NCBI-ProteinID:
ABG31199
RoseoBase:
RD1_1571
UniProt:
Q169Z4
LinkDB
All DBs
Position
1493557..1494048
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AA seq
163 aa
AA seq
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MSISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPN
HYKLGMAANGMTVWDIDDAQAEELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTR
DEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASKGAT
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctcaccccaagaccgcgccctgatcaaagcctgtcaggcgggcctaccgctg
gtgccggaaccctacgcgcagatcgccaaacagctggatatgacacaggcggatgtgatg
aaccgccttgaggtgctgttggggcagggggtcatccgccgtgtgggcattgcgcccaat
cactataaactcggcatggccgccaacggcatgaccgtctgggacatcgacgatgcgcag
gccgaagaactgggcgcgctggtcggtgcgatggaggatgtgacccattgctatctgcgt
ccgcgcaagcggcccgtctggccttataacctttttgccatgctgcacggctccacccgc
gacgaggttgaggaaaaacgccagcatatcgtgcaattgctgggctctgcggtgcgcgcg
catgacgtgctctattcgacgcaaatcctcaagaaaaccggtctgcgactggccagtaaa
ggagccacctga
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