Roseobacter denitrificans: RD1_1573
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Entry
RD1_1573 CDS
T00376
Symbol
nirN
Name
(GenBank) nitrite reductase protein N
KO
K24867
dihydro-heme d1 dehydrogenase
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_1573 (nirN)
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Motif
Pfam:
Cytochrom_D1
Cytochrome_CBB3
Beta-prop_THOC3
Cytochrom_C
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
ABG31201
RoseoBase:
RD1_1573
UniProt:
Q169Z2
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Position
1495237..1496784
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AA seq
515 aa
AA seq
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MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLE
AVIAQGRISTQMPGFDAQISAEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPD
APQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPLAVHGGPKFTPDGRFTFVMSR
DGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVE
AIASSEGLFARRRIEVTEPLDDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSG
LPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLTQIDTDGPGFFMRSHENSPYV
WADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcgcataatttcacttagtctgctggcgctcacaccgctgagcgctcaaggc
gaaccggcagttctctatgccacccattgcgcggtctgccacggcgatgaccgtctgggc
agccttggccctgccttgatccccgaaagcctgcgccgtctgaagggcgacaagctggaa
gcggtgatcgcacaggggcgcatcagcacgcagatgcccggctttgacgcacagatcagt
gccgaggatatcaccgaactggccgcttatctgcacacgcccctgccggaaataccggtg
tggaacgcggagcgtattgccgaaacgcttgaggtgaaccccgattacgtcgcacccgat
gcgccgcaacatgatgccgatccgctcaatatcttcgtggtggtggaaaccggtgatcac
cacatcagcgtgctggatggcgacacatttgacgtgctcgcccggctacccacaccgctg
gccgtgcatggcgggccgaaattcacccccgacgggcggttcacctttgtgatgtcgcgc
gacggctgggtgcaaaagatcgacctgtggtccatgcaggaggtcgcgcgtctgcgcgcg
ggcgtcaacagccgcaacatcgccatgtccaaggacggcaaatacctcgccgtggccaat
tacctgccccatagcctgaccattctctccacggcggatatgtcggtagagcgcatcttt
gatgtggtgggcaaagacggtgaatcctcgcgggtctctgccgtctatcaggccccgcag
cgcgacagtttcattcttgctctgaaagacatccccgagatctgggaggttgcgaccgat
cccaaggcggaccccgtgtacgaaggtttcgtgcatagtcgcgaaaagggcatggtcgag
gcgatcgcttcgtccgaggggctttttgcgcgccgccgcatcgaagtgaccgagccgctg
gatgatttctttttcacgccggattaccggtttctgatcggggccgcgcgggaaagcgac
cggggcgttgtggtcaacctgaacgtgggccgcgagacgcatgaattgccgctctcgggt
ctgccgcatctggggtcgggcatctcttgggagtatcaggggcggcgcgtcatggcgaca
ccgcacctgcgcgaggcaaaactgtcggttatcgacattcagaactgggaagtcctgacg
cagatcgacaccgacgggccggggtttttcatgcgcagccatgaaaattcgccctacgtc
tgggctgatgtgtttttcggccccaaccgtgacgtgatgcatgtgatcgacaagcagacg
ctggagatcgtcaagaccctgcgccccgtgcccggcaagacgctggcgcatgtggagttt
gatcgtgaaggtcgccacgcgcttgtcagcctgtgggaagacgacggggcgatcctgatc
tacgacgcgcagacgctggaagaagtcaaacggctacccatgagcaaaccatcagggaaa
tacaatgttttcaataagatcaccttttctgacggcaccagtcattga
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