Roseobacter denitrificans: RD1_1628
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Entry
RD1_1628 CDS
T00376
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00190
Oxidative phosphorylation
rde00650
Butanoate metabolism
rde00720
Other carbon fixation pathways
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rde_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1628 (sdhA)
00650 Butanoate metabolism
RD1_1628 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RD1_1628 (sdhA)
00720 Other carbon fixation pathways
RD1_1628 (sdhA)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RD1_1628 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ABG31255
RoseoBase:
RD1_1628
UniProt:
Q169T8
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All DBs
Position
1567480..1569285
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AA seq
601 aa
AA seq
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MAEYEYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASL
ANMGPDNWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQR
PFGGHTTEFGEGPAVQRTCAAADRTGHAILHTLYGQSLKNNAEFYIEYFAIDLIMSDDGI
CQGVLCWKLDDGTLHLFSSKMVVLATGGYGRAYFSATSAHTCTGDGGGMTARAGLPLQDM
EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPQYKDLAPRDYVSRCMTME
IREGRGVGANGDHIHLNLNHLPPETLKLRLPGISESARVFAGVNLNKEPIPVLPTVHYNM
GGIPTNYWGEVLAPTPDDPDRISPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
RAGKIVDPNSPVPSPNQKSVEAALDRFDNARYAKGHMPTAALRLEMQQTMQKDAAVFRAN
ETLAEGKKAMEEVADKWSDVGVTDRSLVWNSDLMETLELANLIPNAVATITGAEARKESR
GAHAHEDFPERDDENWRKHSLIWFKGNKASLGYRGVHEQALTSHNDGGIDPKKIAPKKRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatacgaatatgaaacacatgaatacgacgttgtcgtcgtaggagcaggcggt
gctggcctgcgtgcgactctcggcatggccgagcaggggcttcgcaccgcctgcgtcacc
aaagtattcccgacccgctctcatacggttgccgcgcagggcgggatcgccgcctcgctg
gcgaatatggggccggataactggcagtggcatatgtatgacacggtcaaagggtcggac
tggctgggcgatacggatgcgatggaatacctcgcccgcgaagcgcccaaggcggtttat
gagctggaacactacggtgtccccttcagccggacagaagagggcaagatttaccagcgc
cccttcggcggccacaccaccgaattcggcgaaggccccgcggtgcagcggacctgtgcc
gccgccgaccggacgggccacgcgatcctgcacacgctttatgggcagtcgctcaagaac
aacgcggaattctacatcgagtatttcgcgattgatctgatcatgtccgacgatggcatc
tgtcagggggtgctgtgctggaagctggacgacggcacgctgcacctgttctcttcgaaa
atggtggttctggcgacgggtggctatggccgtgcctatttctctgcaacgtcggcgcat
acctgcaccggggatggcggcggcatgaccgcgcgtgcgggtctgccgttgcaggatatg
gaattcgttcagttccacccgacgggcatctacggggcaggctgcctcatcaccgaaggg
gcgcggggcgaaggcggttatctgaccaattctgagggcgaacgcttcatggaacgctat
gcgccgcagtataaggacctcgcgccgcgcgattatgtcagccgctgcatgacgatggaa
atccgcgaaggacgcggcgttggcgcgaacggcgatcacattcacctcaacctgaaccac
ctgccgccagaaacgctgaaactgcgcctgccgggtatttcggaaagcgcgcgcgtcttt
gcgggcgtgaacctcaacaaggaaccaatcccggttctgccgacggtgcattacaacatg
ggcggtatcccgacgaattactggggtgaggtgctggcgccgacaccggacgatcctgat
cgtatctcgcccggtttgatggctgtgggcgaagcgggctgtgcctcggttcacggggcc
aaccggctggggtcgaactccctgatcgaccttgtggtctttgggcgtgcggcggcgatc
cgggcgggcaagattgtcgatcccaacagcccggtgccaagcccgaaccagaaatccgtt
gaggcagcactcgatcggttcgacaacgcgcgctacgccaaagggcatatgccgaccgcc
gctttgcgccttgaaatgcagcagaccatgcaaaaagacgccgctgttttccgtgccaac
gaaacccttgccgaaggcaagaaggcaatggaagaggttgcggacaaatggtcggacgtt
ggtgtcaccgaccgtagccttgtgtggaattccgacctgatggaaacgctcgaactcgcc
aacctgatccccaacgcggtggcgacgatcaccggggccgaagcccgcaaggaaagccgc
ggcgcgcatgcgcatgaggatttcccggagcgggatgacgagaactggcgcaagcattca
ctgatctggttcaagggcaacaaggcgagccttggctatcgcggcgtgcatgaacaagcg
ctcaccagccacaatgatggcggcattgatcccaaaaagatcgcgcccaaaaaacggacg
ttctga
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