Roseobacter denitrificans: RD1_1661
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Entry
RD1_1661 CDS
T00376
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00541
Biosynthesis of various nucleotide sugars
rde01100
Metabolic pathways
rde01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RD1_1661 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
RD1_1661 (kdsA)
Enzymes [BR:
rde01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RD1_1661 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
Lipid A
RD1_1661 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABG31286
RoseoBase:
RD1_1661
UniProt:
Q169Q7
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All DBs
Position
complement(1597171..1598004)
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AA seq
277 aa
AA seq
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MTHVPVGDLVIGNDRPLTVIAGPCQLESADHAQMIAGRMKEACDKAGAQYVFKASYDKAN
RTSLSGIRGPGMDEGLKILQSVGQAIDVPVLTDVHNEGQCAPAAQAVDILQIPAFLCRQT
DMLLAAGQTGAAVNVKKGQFLAPWEMSNITTKIESTGNTRILLTERGTSFGYNTLVADMR
ALPQMAQTGYPVVMDATHSVQQPGGKGGSSGGQREFAPVMARAAVAIGVAAVFIETHENP
DASPSDGPNMIYLDQMPDLIETLMQFDALAKARPVVI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacacatgttcccgtcggcgatcttgtgatcggtaacgaccgccccctgaccgtgatc
gcaggcccttgccagttggaaagcgcggatcacgcccagatgatcgcaggccgcatgaaa
gaggcctgcgacaaggccggcgcgcaatatgtgttcaaggcctcatacgacaaggcaaac
cggacgtcactgtccggcattcgcggccccggcatggatgagggcctcaagatcttgcaa
tcggtgggacaggcaattgatgtgcccgtcctgaccgatgtgcacaatgagggacaatgc
gcgccagccgcccaagccgtcgatatcttgcaaatcccggcgtttttgtgccgccagacc
gatatgctgctggcggcgggtcaaaccggggctgcggtcaacgtcaaaaagggacagttt
ctggccccctgggagatgtcgaacatcacgaccaagatcgaaagcaccggcaacacccgt
atcttgctgaccgagcgtgggacgtcctttggctataacacgctggtggctgacatgcgc
gccctgccccagatggcgcaaaccggctatccggtggtgatggatgcgacacattcggtg
cagcaaccgggcggcaagggtggatcatcgggcggtcagcgcgaatttgcacccgtgatg
gcgcgggcggcggtcgccattggtgttgccgccgtcttcattgaaacgcatgaaaacccg
gacgcctcgccctcggacgggcccaatatgatatacctcgaccagatgccggacctgatc
gagacgttgatgcaatttgatgcgctggccaaggccagaccggtcgtgatctaa
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