Roseobacter denitrificans: RD1_1701
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Entry
RD1_1701 CDS
T00376
Symbol
soxB
Name
(GenBank) sarcosine oxidase, beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00260
Glycine, serine and threonine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD1_1701 (soxB)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RD1_1701 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RD1_1701 (soxB)
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Motif
Pfam:
DAO
Thi4
FAD_binding_2
NAD_binding_8
Pyr_redox_3
FAD_binding_3
FAD_oxidored
Pyr_redox_2
Trp_halogenase
Pyr_redox
Amino_oxidase
Rhodanese
BDI_0842
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
ABG31325
RoseoBase:
RD1_1701
UniProt:
Q169L8
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All DBs
Position
1635191..1636444
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AA seq
417 aa
AA seq
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MTHFSGISLLKNALSGHKNWPEQWPDSAPKDEYDVIIVGAGGHGLGAAYYLAKEHGITNV
AVIEKGWLGGGNTGRNTTIIRSNYLYDESARLFDHALDLWDNLSTELNYNVMYSKRGVMM
LAHNVHDVQSFQRHIHANRLNGVDNRWLTPKEAQEFCPPLNISPDARYPVMGAALQQRAG
TARHDAVAWGYARQAAKRGVDIIQNCPVLSIRRGADGAVEGVETGKGFIKAKKVAVSAAG
HTSVVMDTAGVRMPLESYPLQALVSEPIKPVFPCVVMSNTVHAYISQSDKGELVIGSGTD
QYTSYSQRGGLPLIEHTVAAICEIFPIFNRMRMLRKWGGIVDVTPDRSAILGKTPVKGLY
VNCGWGTGGFKATPGAAHTLAWTVAKDEPHPINAPFTLERFTTGRLIDEAAAAAVAH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacccatttttccgggatatcgctcctcaagaatgctctgtccggccataagaactgg
cccgagcaatggcccgactcggctcccaaggacgaatacgatgtgatcatcgtcggtgcg
ggtggtcacgggttgggcgcggcctattaccttgcgaaagaacacggcatcacgaatgtc
gccgtgatcgaaaaaggttggctcggtggtggcaataccgggcggaacacgacgattatc
cgatccaactatctctatgacgaaagcgcgcggctttttgatcatgcccttgatctgtgg
gacaacctgagcactgaattgaactacaacgtgatgtattcaaagcgcggtgtgatgatg
ctcgcgcataatgtgcatgacgtccaaagcttccagcggcatattcacgccaaccgcctg
aacggtgtggacaaccgctggctcaccccgaaagaggcgcaggaattttgcccgccgctc
aatatctcgccggatgcgcgctatccggtcatgggcgctgccttgcagcaacgcgcagga
accgcacggcacgacgcggtggcctgggggtatgcacgtcaggcagcaaaacgcggcgtg
gatatcatccagaactgcccggtgctgtcgatccggcgtggtgcagatggcgcggtcgag
ggcgtggaaaccggcaaagggttcatcaaggccaagaaggtcgccgtctccgccgccgga
cacaccagcgtggtgatggacacagccggcgtgcgcatgcccttggaaagctatccgctg
caagcgcttgtctcggaaccgatcaagcccgtgttcccgtgcgtagtgatgtccaacacc
gtgcacgcctacatcagccagtccgacaagggcgagttggtaatcgggtcgggcaccgat
caatacaccagctattcgcagcgcggtggcttgcccctgatcgaacacaccgtcgcggcg
atctgcgagattttcccgatcttcaaccgcatgcggatgctgcgtaaatggggcggtatc
gtcgatgtgaccccggaccgctcggccattctgggcaagacgccggtcaaggggctctat
gtcaactgcggctggggcacggggggcttcaaggccacgccgggggcggcgcacacgctg
gcatggaccgttgcaaaggacgaaccgcacccgatcaacgcgcccttcacgctggagcgt
ttcacgacgggtcggctcatcgacgaagccgccgccgccgccgtcgcgcattaa
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