Roseobacter denitrificans: RD1_1702
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Entry
RD1_1702 CDS
T00376
Symbol
soxD
Name
(GenBank) sarcosine oxidase, delta subunit
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00260
Glycine, serine and threonine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD1_1702 (soxD)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RD1_1702 (soxD)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RD1_1702 (soxD)
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Motif
Pfam:
SoxD
EDR4-like_1st
Motif
Other DBs
NCBI-ProteinID:
ABG31326
RoseoBase:
RD1_1702
UniProt:
Q169L7
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All DBs
Position
1636456..1636755
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AA seq
99 aa
AA seq
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MLLIHCPYCDETLPELEFAYAGEAHIDRPADPSKLTDEEWRDFLFIRTNVKGVHAERWRH
INGCGRFFNALRDTVSDRFVTTYKAGQPRPDTTAEEAGK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgctattgatacattgcccctattgcgatgagacgctgcccgaattggaattcgcgtat
gcgggtgaggcgcacatcgaccgccccgccgatccatcaaagctgacggatgaggaatgg
cgcgatttcctgtttatccgtaccaacgtgaaaggcgtgcacgccgagcgctggcgtcac
atcaacggttgcggacgctttttcaatgccctgcgggacacggtcagtgaccgttttgtc
acaacctacaaggccgggcagccccgccctgacacgacagccgaggaggccgggaaatga
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