Roseobacter denitrificans: RD1_1754
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Entry
RD1_1754 CDS
T00376
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_1754 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1754 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1754 (valS)
Enzymes [BR:
rde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RD1_1754 (valS)
Amino acid related enzymes [BR:
rde01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RD1_1754 (valS)
Transfer RNA biogenesis [BR:
rde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD1_1754 (valS)
Prokaryotic type
RD1_1754 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABG31375
RoseoBase:
RD1_1754
UniProt:
Q169G8
LinkDB
All DBs
Position
complement(1681228..1684323)
Genome browser
AA seq
1031 aa
AA seq
DB search
MALDKTFDAKEAEARLYAAWEQAGAFKAGANARAAAETFSIMIPPPNVTGSLHMGHAFNN
TLQDILIRWHRMRGFDTLWQPGTDHAGIATQMVTEREMAANGEGRRQDMTRDDFVARVWQ
QKVKSRGTIIGQLKRLGASCDWSREAFTMGGAPGDPDAGNGPNFHDAVIKVFVDMYNKGL
IYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFKYPLAEGATYEYVEKDEDGNVTLRE
TRNYISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCEIPVGPKEHRRLIPIITDEYPD
PDFGSGAVKITGAHDFNDYAVAKRNGIPLYRLMDTKAAMRDDGAPYAEAAAIAMAVAQGE
RTLTEAEADSVNLVPDELRGLDRLKARKAVVKQITAEGLAVMVPVANPDPEDAFLPVDEP
FLEPLVENKKIMQPFGDRSKVVIEPMLTDQWFVETSKIVQPAIDAVRNGDTQIFPEQDKK
VYFNWLENIEPWCISRQLWWGHQIPVWYGPSKYEISDYPATHSGTPKSFCASSFDDACEL
AKEYYGDNVSFAQHPQDEGTMQYGFGFSNGSLSSVSLRRDPDVLDTWFSSGLWPIGTLGW
TGDAELDAQNDALQKYFPTSTLITGFDIIFFWVARMMMMQYAVTGQKPFSTVYVHALVRD
EKGKKMSKSLGNVIDPLDMIDEFGADAVRFTLTAMAAMGRDLKLSTQRIAGYRNFGTKLW
NACRFAEMNEVFAQRAARTDVIPTQNRPPADVEQAVNKWIIGETAKVREEIDAALENYRF
NDAANAAYAFVWGKVCDWYVELSKPLLQDAANAEFAAETRATMAWVLDQCMILLHPIMPF
ITEDLWAQTGRRDEMLVLTDWPIYTAAELVDPDADAEVNWVISLIESIRSARAQMHVPAG
LYVPLVVTEIDAAGQTAWDRNEVMIKRLARVEALEHAEGFPKGTVSLAVRGASFGLPLAD
IIDIAEEKARLEKSLGKLAKELGGLRGRLNNPKFAASAPPEVVEETRANLALREEEEAKL
KEALARLAELG
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggacaagacattcgacgcaaaagaggccgaagcacgcctctacgccgcctgg
gaacaggcgggcgcattcaaggccggggccaacgcccgggcagctgctgaaaccttttcg
atcatgatccccccgcccaatgtgacgggatcgctgcacatggggcacgccttcaacaac
acgctgcaggatatcctgatccgctggcaccgcatgcgcggcttcgacacgctctggcag
cccggcaccgatcacgcgggcatcgccacgcagatggtcaccgaacgcgaaatggccgcc
aatggcgaaggccgccgccaagacatgacgcgcgatgacttcgttgcccgtgtctggcag
caaaaggtcaaatcacgcggcacgatcatcgggcaactcaaacgcctcggcgcgtcctgt
gactggtcgcgcgaagccttcaccatgggcggcgcaccgggcgaccctgacgcaggcaac
ggcccgaatttccacgacgcggtcatcaaggtcttcgtggacatgtacaacaagggcctc
atttatcgcggcaagcggctggtcaactgggacccgcatttcgaaaccgcgatctcggac
cttgaggtcgagaacatcgaagtcgatggccacatgtggcacttcaaatacccgctcgcc
gagggggccacttatgaatacgtcgaaaaggacgaggacggaaacgtcaccctgcgcgag
acccgcaattatatctcgatcgccacgacccggcccgaaaccatgctgggcgatggcgcg
gttgccgtgcatccgtcagatgaacgctatgcgccaatcgtcggcaagctctgcgaaatc
ccggtcggacccaaggaacaccgccgcctgatcccgatcatcaccgatgaataccccgat
cccgacttcggctccggtgcggtcaagatcacaggcgcgcatgacttcaacgactacgcc
gtggccaaacgcaacggcatcccgctctaccgcctgatggacaccaaagccgccatgcgc
gacgacggtgccccctacgccgaggccgccgcgattgcgatggccgtggcccagggcgag
cgcacactcactgaagccgaagccgactcggtcaacctcgtgccggacgaattgcgcggg
ctggaccggctcaaagcccgcaaggcggtcgtgaaacagatcaccgccgaagggctggcc
gtcatggtccccgtcgccaaccccgaccccgaagacgcgtttttgcccgtggacgaacct
ttccttgagccgctggtcgagaacaaaaagatcatgcagccctttggcgaccgctccaag
gtcgtcatcgagccgatgctgaccgaccagtggttcgtcgaaacctccaaaatcgtgcag
cccgcgattgacgccgtgcgcaatggcgacacccaaatcttccccgagcaggacaagaag
gtctacttcaactggctggaaaacatcgagccatggtgcatctcgcggcaattgtggtgg
gggcaccagatcccggtttggtacgggccgagtaaatacgagatttccgactatcccgcg
acccattcgggtacacccaaatcgttctgtgcatcatcgtttgacgatgcatgtgaacta
gccaaagaatactacggcgataacgtttcgtttgctcaacatccgcaagacgaaggcacc
atgcaatatggttttggctttagcaacggtagtctgtcctcggtctctttacgtcgcgac
cccgacgtcctcgacacatggttctcctccggcctctggcccatcggcacgctgggttgg
acgggcgacgccgaactggacgcgcagaacgacgcgctgcaaaaatacttcccgacctcc
acgctgatcaccggctttgacatcatcttcttctgggtcgcccggatgatgatgatgcaa
tatgcggtgacggggcaaaagccgttctcgaccgtctatgtccacgcgctcgtgcgcgac
gagaagggcaagaagatgtcgaaatccctcggcaacgtcatcgacccgctcgacatgatc
gacgagttcggcgcggacgccgtgcgctttaccctcaccgccatggccgccatggggcgc
gatctgaaactctccacccagcgcatcgcgggctaccgcaatttcggcaccaaattgtgg
aacgcctgccgctttgcggagatgaacgaagtctttgcccagcgcgcggcccgcaccgac
gtgataccgacgcaaaaccgacctcctgccgatgtcgaacaggccgtgaacaaatggatc
atcggagagaccgcgaaagtccgggaagagatcgacgcagcgctcgaaaattaccgtttc
aacgacgcggccaacgcggcctatgcctttgtctggggcaaggtctgtgactggtatgtg
gagctgtccaaacccctgttgcaggacgccgccaacgccgaattcgcggccgagacacgc
gcgacgatggcgtgggtgctggatcaatgcatgatcctgctgcaccccatcatgcccttc
atcaccgaagacctctgggcgcaaaccggccgtcgcgacgagatgctggtgctcaccgat
tggcccatctataccgccgctgaactggtcgatcccgatgccgatgcggaagtgaactgg
gtcatcagcctgatcgaatccatccgctccgcacgggcgcaaatgcatgtccccgcaggg
ctttacgtccccctcgtcgtcaccgagatcgacgccgccggacagaccgcttgggaccgc
aacgaagtgatgatcaaacgcctcgcccgcgttgaagcacttgagcacgcagagggtttc
cccaaaggcacagtatccctcgccgtgcgcggcgcatcctttgggctgccgctggccgat
atcattgatattgctgaggaaaaagcgcggcttgaaaagtcactgggcaagctcgccaag
gagcttggcgggctgcgcgggcggctgaacaatccgaaattcgcagcctccgccccgcct
gaagtggtcgaggaaacccgcgccaacctcgccctgcgcgaagaggaagaagccaagctg
aaagaagcgctggcgcgactggccgaactgggctga
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