Roseobacter denitrificans: RD1_1781
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Entry
RD1_1781 CDS
T00376
Name
(GenBank) PQQ enzyme repeat family protein
KO
K17713
outer membrane protein assembly factor BamB
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1781
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_1781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ
Beta-prop_ACSF4
Beta-prop_EMC1_N
Motif
Other DBs
NCBI-ProteinID:
ABG31400
RoseoBase:
RD1_1781
UniProt:
Q169E3
LinkDB
All DBs
Position
1709222..1710565
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AA seq
447 aa
AA seq
DB search
MFFVAPARVSRPLSLLLAATVFLAACAEDDTILVGKRESVESILNGTEATERLAIQNEER
AISLPAVQSNDSWPQAYGSPAFRTAHPALAAQISEIWSADIGQGDGRRQRIVATPVVGAG
LIYTLDAEALVSATSPSGQTVWQSDVRPARDRGGQATGGGVAYDSGRVFVSLGYGNLVAL
DAATGAELWRQRLDGTASGTPTIVDGIVYLTAGDDRGWAVTADEGRLLWQLTASPDVTNV
LGAPAPAVAGDLAVFAFGSGEVQAVFRRGGLRRWDASVRGERPGTALGSIGDVTAPPVIV
GNRVYVGNQSGRLVALSLESGARIWTANEGAEGNIVAAGDSIFILSDLNELLRLDASDGS
RIWGTPLPRFVKDRPRRRAEIYAHHGPILAGRRLYVASNDGFLRSFDPASGALVNTVEIA
GGATTSPVVAGGVLYVVSSNGRLHAFR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtagccccggcgcgcgtttcgcgacctctgtctttactgctggctgcaacg
gtttttcttgcggcctgtgccgaagacgacactattctggtgggcaagcgcgagagcgtc
gaatccattctcaacgggacagaggcaacggagcgcctcgccatccagaacgaagaacgc
gccatttccctgcccgcggtgcaatcgaatgacagttggccgcaggcctatggctcaccc
gcatttcgcacagcgcacccggcgcttgcagcacagatcagcgaaatctggtcggctgac
atcgggcagggggacgggcgcagacagagaattgtcgccacaccggttgtcggggccggg
ctgatttacaccctggatgccgaggctctggtgagcgcgacctcaccgtccgggcaaacg
gtctggcagtcggatgtgcgccccgcccgggatcgcggcggtcaggcaacaggcggcggt
gtggcctatgacagcgggcgcgttttcgtctcgctggggtacggcaatctggtggctctg
gatgcggcaacgggtgcggagttgtggcgtcagcggcttgatggcacagcctccggcacg
ccgacgatcgttgacggtatcgtttatctgaccgctggcgatgatcgcggctgggcggtt
acggcggatgaggggcggctgttgtggcaactcaccgcctcgccggatgtgacgaacgtg
ttgggcgcgccggcccctgcggtggcgggtgatctggcggtctttgcctttggctcgggc
gaggtgcaggcggtgttccggcggggcggcttgcggcgctgggatgcatccgtgcgtggt
gagcgtccgggcacggcccttggcagcatcggcgatgttacggccccgccggtgatcgtg
ggcaaccgcgtttatgtcggcaatcagtcggggcgactggtggcattgtcccttgagtca
ggtgcacgcatctggaccgccaatgagggggcagagggcaacatcgtggcggcaggcgac
agtattttcatcctctccgatctcaacgaattgctgcgccttgatgcctctgacggcagc
cgcatctggggcacgcccctgccgcgtttcgtcaaggaccggcccagaagacgggccgag
atttatgctcaccacgggccgatcctcgccggtaggcggctttacgtggcctccaacgac
gggttcctgcgcagctttgatcctgccagcggcgccttggtaaacacggtcgagatcgcg
ggcggtgccacgaccagcccggtggttgcgggcggtgttctttatgtcgtgtcgtcaaat
ggccgattgcatgctttccgttga
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