Roseobacter denitrificans: RD1_1801
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Entry
RD1_1801 CDS
T00376
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00740
Riboflavin metabolism
rde00790
Folate biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RD1_1801 (ribB)
00790 Folate biosynthesis
RD1_1801 (ribB)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RD1_1801 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
RD1_1801 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
ABG31419
RoseoBase:
RD1_1801
UniProt:
Q169C4
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All DBs
Position
1730594..1731718
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AA seq
374 aa
AA seq
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MTFETSGPVERELRDSISPIEAIIEDARHGRMFILVDHEDRENEGDLVIPAQFADAQAIN
FMATHGRGLICLPMTSERIETLGLPMMAVNNSSRHETAFTVSIEAREGVSTGISAPDRAL
TVAIAIDEDKGQADIATPGHIFPLRARTGGVLARAGHTEAAVDISRLAGLHPSGVICEIM
KPDGEMARLPDLVSFAQEHGLKIGTISDLIAYRHKHDNLLRQRDERMVTSAFGGEWCMRI
FSDEMTGTDHVMLSKGDISTPEPVLVRTHALNALEDVLGLGPSPADELPRAMQIIAEEGR
GAVLLFREPHPKLRLDGDEDDGPRTIKRTGVGAQIMSTMGLHELILLTDSPQTKYLGLEA
YNLSIVGTRPITKD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaacatccggcccagttgagcgtgagctgcgcgacagcatctcacccatc
gaagcgatcatcgaggatgcccgtcacggtcggatgttcattctggtcgatcatgaagat
cgcgagaatgaaggcgacctcgtgatccccgcacaatttgccgacgcgcaggcgatcaac
ttcatggccacccatggccgtgggctcatctgcctgcccatgacctcggagcgcatcgaa
acgctgggtctgccgatgatggcggtcaacaattcgtcgcgccatgagacggccttcacc
gtgtcgatcgaggcgcgcgaaggggtgagcaccggcatatccgcccctgacagggcgctg
acggtcgccatcgccattgatgaggacaaggggcaggcggatatcgccacgccggggcat
atcttcccgctgcgcgcgcgcacgggtggcgtactggcgcgggccgggcataccgaagcc
gcagttgatatcagccgcttggccgggctgcatccctcgggcgtgatttgcgaaatcatg
aaaccggatggtgaaatggcgcgtctgccggatcttgtgagttttgcgcaggaacacggc
ctgaagatcggcacgatcagcgatctgattgcctatcgccacaaacacgacaatctgctg
cgccagcgggacgagcggatggtcacttccgcctttggcggtgagtggtgcatgcggatt
ttctccgatgagatgaccggcacggatcacgtcatgctgtccaagggcgatatttcgacg
ccggaaccggtgcttgtgcgcacccacgctctgaacgcgttggaagacgttctgggcctt
ggtccaagcccggcggatgagttgcctcgcgccatgcagatcatcgccgaggaagggcgc
ggcgcggtcctgctgtttcgcgaaccgcacccgaaactgcgtctggacggtgatgaggac
gacggcccgcgcacgatcaaacgcaccggtgtgggcgcgcagatcatgtcgaccatgggg
ctgcacgaactgatcctgctgaccgacagcccgcaaacgaaatacctggggcttgaagcc
tacaacctctccatcgtcgggacccgcccgattacaaaggactga
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