Roseobacter denitrificans: RD1_1814
Help
Entry
RD1_1814 CDS
T00376
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rde03021
]
RD1_1814 (rpoH)
Transcription machinery [BR:
rde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RD1_1814 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
HTH_3
HTH_19
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
ABG31430
RoseoBase:
RD1_1814
UniProt:
Q169B3
LinkDB
All DBs
Position
1737568..1738464
Genome browser
AA seq
298 aa
AA seq
DB search
MANYANLPAPTPEGGLNRYMQEIRKFPLLEPQEEYMLAKRWVEEQDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSGQKKLFFNLRKAKNKIGALEEGDLHPDNVARIAKDLGVTETEVISMNRRM
SGGDASLNATVGSEGEGTMQWQDWLEDEDADQAGDYEARDELEARRELLADAMSVLNDRE
RDILQQRRLSEQTVTLEDLSAEYNVSRERIRQIEVRAFEKLQKKMRDLAKEKGMPVSA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccaattacgcaaatctgccggccccgacgccggagggcggtttgaaccgctacatg
caggaaattcgcaagttcccgctgcttgaaccgcaagaagaatacatgctggcaaagcgc
tgggtcgaagaacaggatacggaggcggcccataagatggtcacttcgcatctgcgtctg
gcggcaaaaatcgccatgggctatcgtggctacggattgccgcaggccgaagtcatatca
gaggcgaatgtcggcttgatgcaggcggtgaaacggttcgatccggaaaaagggttccgg
ctggccacatatgcgatgtggtggatccgcgcgtcgattcaggaatatatcctgcggtcc
tggtcgctggtaaagctgggcacgacatcgggtcaaaagaagttgtttttcaatcttcgc
aaagccaaaaacaagattggcgcgctcgaagaaggcgatctgcatcccgacaacgtggca
cgtattgcaaaggaccttggtgtaaccgagaccgaagtcatttcgatgaaccggcgcatg
tcaggcggtgatgcttctctcaatgcgaccgtcgggtccgaaggcgaggggacgatgcaa
tggcaggactggctcgaggacgaggatgccgatcaggccggtgattacgaggcgcgcgac
gagttggaagcgcggcgcgaactgttggcagacgcgatgagtgtcctgaatgaccgggaa
agagatatccttcaacagcgcaggctgtccgagcagacggtgacgctcgaagacctcagc
gccgagtataacgtcagtcgtgaacgtatccgtcagatcgaagtgcgcgcctttgaaaag
ctgcaaaagaagatgcgcgatctggccaaggaaaaaggcatgcccgtttcggcctga
DBGET
integrated database retrieval system
