Roseobacter denitrificans: RD1_1815
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Entry
RD1_1815 CDS
T00376
Symbol
pepF
Name
(GenBank) oligoendopeptidase F, putative
KO
K08602
oligoendopeptidase F [EC:3.4.24.-]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rde01002
]
RD1_1815 (pepF)
Peptidases and inhibitors [BR:
rde01002
]
Metallo peptidases
Family M3
RD1_1815 (pepF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M3
Peptidase_M3_N
Peptidase_M78
Motif
Other DBs
NCBI-ProteinID:
ABG31431
RoseoBase:
RD1_1815
UniProt:
Q169B2
LinkDB
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Position
complement(1738606..1740426)
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AA seq
606 aa
AA seq
DB search
MFQLPFPVRDANASGAADPLGDLPEWNLDDLYTGEDAPELKRDLDWLEQACASFATDYEG
NLETLDAAGFLECVLRNEKISQIAGRIMSYAGLRYYQLTTDAGRAKFMSDLQEKITNFTT
PLVFFTLEINRLADDHLDGLYAHNGDLARYKPIFDRIRAMKPYQLSDELEKFLHDLGVVG
DAWERLFDETIAGLEFDVDGETLNIEGALNLLTDPDRTKREAAARELADVFGANVKTFAR
VHNTQAKEKEIADRWRGMESPQQGRHLSNQVEPEVVEALRNAVVKSYPKLSHRYYELKRK
WLGLDKMQVWDRNAPLPLEDNRIVGWDQAQDMVMEAYTAFDPRMGEIAAPFFSKGWIDAG
VKPGKAPGAFAHPTVTDVHPYVMLNYLGKPRDVMTLAHELGHGVHQVLAAGQGEMLSSTP
LTLAETASVFGEMLTFRKMLDGAKDNAERKVLLAGKVEDMINTVVRQIAFYDFECKLHDA
RRGGELTPDDINALWMSVQAESLGPAFEFMDGYETFWAYIPHFVHSPFYVYAYAFGDGLV
NALYSVYAEGTEGFEEKYFDMLKAGGSKHHKELLAPFGLDASDPAFWDKGLSMISGFIDE
LEAMEE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacttccctttccggtgcgcgatgcaaatgcttcaggcgcggctgatcccttg
ggcgatctgcccgagtggaatctcgacgatctctataccggcgaggatgcgcccgaactg
aaacgcgatctggactggctggaacaggcctgcgccagctttgccacggattacgagggc
aatctggaaaccctcgacgctgcgggctttcttgaatgcgtgttgcgcaacgaaaaaatc
agccagatcgccgggcggatcatgtcctatgccgggctgcggtattaccaactcaccaca
gatgccgggcgggccaaattcatgtccgacctgcaggaaaagatcaccaatttcaccacg
ccgctggtatttttcacgctggagatcaaccggcttgcggatgatcatcttgacgggctt
tatgcgcataatggcgatcttgcgcgctataaacccatctttgatcgcatccgcgcaatg
aaaccctatcaactcagtgatgagttggagaagttcctgcatgatctcggcgtggtgggc
gatgcctgggagcggttgtttgacgaaaccatcgccgggctggaattcgatgttgacggt
gagacgctcaacatagagggcgcactgaacctgctcacggatccggaccgcaccaaacgc
gaagccgccgcgcgcgagttggcggatgtcttcggcgcgaacgtcaaaacctttgcccgc
gtgcacaacactcaggccaaggaaaaagagatcgcggatcgctggcgcggcatggaaagc
ccacagcaaggccgccatctgagcaatcaggtcgaacccgaagtggtcgaagcgctgcgc
aacgcggtggtgaaatcctatccgaaactcagccaccgctattacgagctcaagcgcaaa
tggctgggcctcgacaagatgcaggtctgggaccgcaacgcgccgctgccgctggaggac
aaccgcatcgtcggctgggatcaggcgcaagacatggtgatggaggcctataccgccttt
gatccgcgcatgggcgagatcgccgcgccgtttttcagcaagggctggatcgacgcaggc
gtgaagcccggcaaggcacccggtgcttttgcgcatccgaccgtcaccgatgtgcacccc
tatgtcatgctgaactacctcggcaaaccacgcgatgtgatgaccctcgcgcatgagctt
gggcacggtgtccatcaggttctggccgccggacagggggagatgctgtcgtccacaccg
ctcacactggcggagacggccagcgtgtttggcgaaatgctcaccttccgcaagatgctg
gacggcgccaaggacaacgcggaacgcaaagtcctgctggcgggcaaggtcgaggatatg
atcaatacggtcgtgcgccagatcgccttttacgatttcgagtgcaaactgcatgatgcg
cggcgcggtggcgaattgacccccgatgacatcaacgcgttgtggatgtccgtgcaggcc
gaaagcctcggaccggcgtttgaattcatggacggatacgaaaccttctgggcctatatc
ccgcatttcgtgcattcgccgttctacgtctacgcctatgcttttggcgacgggctcgtg
aatgcgctctattccgtttacgcggaaggcaccgaaggatttgaggaaaaatacttcgac
atgctgaaagcaggtggctcaaagcaccacaaggaattgctggcgccattcggtctggat
gcctccgaccctgcgttctgggacaaggggctgagcatgatttcaggcttcatcgacgag
ttggaagcgatggaagagtaa
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