Roseobacter denitrificans: RD1_1837
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Entry
RD1_1837 CDS
T00376
Name
(GenBank) transcriptional regulator, LysR family, putative
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_1837
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RD1_1837
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ABG31452
RoseoBase:
RD1_1837
UniProt:
Q168Z1
LinkDB
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Position
complement(1762093..1762983)
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AA seq
296 aa
AA seq
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MQFQWLDDVLVLLEEGNMSRAAARRNITQPAFSRRIRGFEDWLGTDIIERKMNRVEISEA
LISNEDEIRALMTRLRELRTKIAHYEKSRMTVELAAQHAPICAAFPDMALRARQELHGLQ
FRLRAGNLNDCVSMFLRGDTSMLLCYQAESVRRLQFGPDIIRGVWGNDYLVPVVGGALRS
VVTDFGTVPAHTPAIVYPEHSYFGEVLRRNNRPFGIPSSSANTFSVSAFSSGTRELVLKG
LGIGWLPFSMAHREIESGELISLANHYGQEALQVAIYADKTVETARTLMEIWAQDG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcaatggctggacgacgttcttgtgctgctggaggaaggcaatatgtctcgg
gctgcggcgcgccgaaacatcacccagcctgcgttttcaaggcggattcgcgggtttgag
gattggctcggcacggacattatcgagcgcaagatgaaccgggttgagatcagcgaagcg
ctcatatccaacgaagatgagattcgcgcactgatgactcgtttgcgcgagttgcgcaca
aaaattgcgcattatgaaaagtcgcggatgaccgttgaactggccgcccagcacgcaccg
atatgtgcggcttttcccgacatggccctgcgcgcgaggcaagagctgcacggcctgcag
ttccggttgcgcgccggcaatctgaacgactgcgtgtccatgtttctacgcggtgataca
agcatgttgctatgctatcaggcagaaagtgtgcgcaggcttcaattcggtccggacatc
atacgcggcgtatggggaaatgactatctggtgcccgtcgtcggtggggccttgcgctct
gtcgtgacagatttcggcacggttcccgcgcatacgcccgcaatcgtctatccagagcac
agctactttggcgaagtgctgcgcaggaataacagacctttcggcattccgagttccagc
gcaaacacgttcagcgtttcggccttttcgagtggtacgcgcgaacttgttctgaagggg
ttgggcatcggttggttgcctttcagcatggcgcaccgggaaatcgaaagtggagagttg
atttcgcttgcaaaccactacggtcaggaagcgcttcaagtggcgatctacgccgacaaa
acagtcgaaaccgcccggacactgatggaaatctgggcgcaggatggttga
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