Roseobacter denitrificans: RD1_1883
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Entry
RD1_1883 CDS
T00376
Symbol
thrS
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_1883 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1883 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1883 (thrS)
Enzymes [BR:
rde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
RD1_1883 (thrS)
Amino acid related enzymes [BR:
rde01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RD1_1883 (thrS)
Transfer RNA biogenesis [BR:
rde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD1_1883 (thrS)
Prokaryotic type
RD1_1883 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
ABG31494
RoseoBase:
RD1_1883
UniProt:
Q168U9
LinkDB
All DBs
Position
complement(1797934..1799880)
Genome browser
AA seq
648 aa
AA seq
DB search
MAQISLTFPDGSTREFDAGVTAGDVAASISTSLRKKAISATVGGAHYDLAWPIHADATIA
IHTMQDEEQANELVRHDLAHIMARAVQEIWPETKVTIGPVIKDGWYYDFDRAEAFSPEDL
GLIEKKMKEIINKRDPVRTEVWDRARAIAHYEANDEPYKVELINAIPGDEPLRMYWHGDW
QDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTML
EEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTP
QVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRD
LPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHTFCREDQIEAECAAFITYLSSVYQD
LGFEKFEIMFATRPEKRVGSEESWDHVEAALENAIKATGHPYTLDEGEGAFYGPKLDFKL
TDAIGREWQCGTFQVDPNLPERLDATYIGQDGAKHRPYMLHRACLGSFERFIGILIENSA
GKLPFWLAPRQVVVASIISDADDYVLEVVEKLQAAGVRAEADVRNEKINYKVREHSVGKV
PVILAVGAREVEEKTVTLRRLGEKKTSVETLDAVTQALGREATPPDLL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatctctctcacctttcctgatggcagcacacgcgaattcgatgcaggcgtg
accgctggcgatgtcgcagcgagcatttcaacctccctgcgcaaaaaggcgatcagcgcc
accgtcggcggtgcgcattatgaccttgcctggcccatccatgcggatgccacgatcgcg
atccacacgatgcaggacgaagagcaggccaacgaattggtgcgccacgacctggcgcat
atcatggcgcgcgccgtgcaggaaatctggcccgaaaccaaggtgacaatcggtcctgtg
atcaaggacggctggtactatgactttgaccgcgccgaggcgttctctcccgaagatctc
ggtctgatcgagaaaaagatgaaggagatcatcaacaaacgcgaccctgtgcgcacggaa
gtatgggatcgcgcgcgcgccatcgcgcattacgaggcgaacgacgaaccatataaggtc
gaattgatcaacgccattcccggcgatgaacccttgcggatgtattggcacggggattgg
caggacctgtgccgcggcccgcatctgcaacataccgggcaggtgcccggcgatgcgttc
aaactcatgtccatcgcgggcgcgtattggcgcggtgacagtgaccgcgcgatgctgcag
cgtatttacggcgtggcctttaccggcaaggaaaagctcaaggcgcatctgaccatgctg
gaggaagcggccaaacgcgaccaccgcaagctgggccgcgagatggacctgttccacatg
caggaagaagccccggggcaggtcttctggcatccaaatggctggtcgatctacacgacg
ctgcaggattacatgcgccgcaagcagcgcgcggcaggctatcaggaggtcaacaccccc
caggtggttgatcgcaaactgtgggaagcgtccggccattgggacaaatatcaggaacat
atgttcatcgtcgaagtggacgaggatcacgcgcgcgaaaaagcggtcaatgcgctcaaa
cccatgaactgcccctgccacgtgcagatcttcaatcaggggctcaaatcctaccgcgac
ctgcccttgcgcatggctgaattcggctcatgcaaccgctatgagccatccggagcgttg
catggcatcatgcgggtgcgcggctttacgcaagacgatggccacaccttctgccgcgag
gaccagatcgaggcggaatgcgcggccttcatcacctatctgtcgtccgtctatcaggat
ctcggattcgagaaattcgaaatcatgtttgccacacggcccgaaaagcgcgtgggctca
gaggaaagctgggaccacgtcgaggccgcactggaaaacgcgatcaaggcaaccgggcac
ccctatacgctggacgaaggcgaaggcgcattttacgggcccaaactggatttcaaactc
acggatgcgattggccgcgaatggcaatgcggcacctttcaggttgatccgaacctgccc
gagcggctggatgcgacctatatcggtcaggacggcgccaagcatcggccttacatgttg
caccgggcctgccttgggtcttttgaacgcttcatcggaatcctgatcgaaaactctgcc
ggaaagttgcccttctggctggccccgcgtcaggtcgttgtcgcttcgatcatttcggat
gcggatgactacgttctggaggtggttgagaaactgcaggcggcgggcgtgcgcgccgaa
gctgatgtgcgcaacgagaagatcaactacaaagtgcgcgaacactcggttggaaaggtc
ccggtcattctggctgtgggtgcccgcgaggtcgaagagaaaacagtcaccctgcgccgg
ctcggagagaaaaagaccagcgtcgagacactggacgctgtaacacaagccttgggacgc
gaggcaacgccacccgaccttttgtaa
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