Roseobacter denitrificans: RD1_1947
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Entry
RD1_1947 CDS
T00376
Symbol
glyS
Name
(GenBank) glycyl-tRNA synthetase, beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_1947 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1947 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1947 (glyS)
Enzymes [BR:
rde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
RD1_1947 (glyS)
Amino acid related enzymes [BR:
rde01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RD1_1947 (glyS)
Transfer RNA biogenesis [BR:
rde03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD1_1947 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ABG31555
RoseoBase:
RD1_1947
UniProt:
Q168N8
LinkDB
All DBs
Position
1857118..1859304
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AA seq
728 aa
AA seq
DB search
MPDLLIELFCEEIPARMQRRAAQDLQKLVTDGLVEAGLTYASAAAFSTPRRLTLTLEGVL
AASPTTVEERKGPKADAPDKAIEGFLRGAGVAREALETRDTPKGPVLFAKITKEGRPAAQ
IVAEVLEKTIRNFPWPKSMRWGAGTLRWVRPLHSILCILSDEAGTQVVPLSVDHITAGDH
TQGHRFMAPDRFTVTGFDDYAAKLKRAFVVLDPAERADMIWHDATNQAFANGLEVVEDAA
LLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRIERFVTVAN
RDTADNGATILAGNEKVLSARLADAKFFWDNDLRVAKAGMGDWLKALENVTFHNKLGTQA
ERIARVAALARELAPMVGADSDEAEEAARFAKADLSSEMVYEFPELQGLMGRYYLKAAGK
SDAIAAAAEEHYAPLGPSDAVPTASVSVAVALADKLDQFTGMWAANELPTGSKDPYALRR
AALSTIRLILENRLKLPLKNLLEISFSDRYEIAKLEVKRSVERVAHRYPTEKAELKKILE
EELLKISSTVDTRKNGLSEFFHDRLKVYLRDQGIRHDVIDACIAMPGNDDLTLLVKRAKA
LSDVVGTEDGENLIQGFKRANNILTQAQEADGVEYSYGADAKFAETDEERALFKALDTAE
AIITPAMKSEDFATAMSAMATLRAPIDAFFEAVQVNSDNPTVRRNRLNLLNRITQICLSV
ADLTRIEG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatctactgattgaactcttctgtgaagaaatccccgcccgcatgcaacgccgc
gcggcgcaggatttgcaaaaactggtgactgatgggctggttgaggccgggttgacttat
gcctctgcggcggcgttctcgacaccgcgccgtctgaccctcacgcttgagggagtgctt
gcggcaagccccaccaccgtcgaggaacgcaaaggccccaaggccgatgcacccgacaag
gccatcgagggtttcctgcgcggtgcaggtgtcgcgcgcgaggcactcgagacgcgcgat
acgcccaaagggccggtgctctttgccaaaatcaccaaggagggacggcccgccgcgcag
atcgtggcggaagttctggaaaagacgatccgtaactttccttggcccaaatccatgcgc
tggggtgcgggcaccctgcgctgggtgcgcccgttacactcgatcctgtgcattctgtcc
gatgaggcaggtacgcaggtcgtaccgctgagcgtcgatcacatcacggcgggggaccac
acacaggggcatcgtttcatggcgccggaccgctttacggtcaccggctttgatgactat
gcggccaagctgaaacgcgcctttgtcgtgctcgacccggcagagcgggcagatatgatc
tggcacgatgccaccaatcaggcctttgccaatgggcttgaggtggttgaggatgcggcc
ctgctggccgaagttgcggggcttgtggaatggcccgtggtgctgatggggcggattggt
gatgatttcctcgatctgccgcccgaggtgctgcaaacatcgatgaaagagcatcagaaa
ttcttctccgtgcgcaatcccaagacgggccggatcgagcggttcgtcaccgtggccaac
cgcgatacggcggataacggcgcgaccattctggcggggaatgaaaaggtgctgtcggcg
cgtttggcggatgcgaaattcttttgggacaatgatttgcgcgtggccaaggcgggcatg
ggcgactggctgaaagccttggaaaatgtgaccttccacaacaagttgggcacgcaggcg
gagcggatcgcccgcgtcgcggcccttgcccgggagctggccccgatggtgggtgcggac
tcggacgaggccgaggaggccgcgcggttcgccaaggcggacctgtcgtctgaaatggtc
tatgaattccctgaattgcaaggcttgatggggcgctactacctgaaagctgccgggaag
tctgacgccatcgcggcggcggctgaggaacactacgcgcccttagggccatccgacgcc
gtacccaccgcctcagtcagcgtcgctgtggcgctggccgacaaacttgaccaatttact
ggaatgtgggctgcgaatgagctgccaactggttcaaaagatccttatgcgctgcgacgc
gcggctctcagcaccattcggctaattctcgaaaataggctcaaattaccgctcaaaaat
ctgttggaaatatcattttccgaccgatacgaaattgccaaactcgaagtgaagcgtagt
gttgaaagggttgctcataggtatccaacagaaaaggcagagctaaaaaagatactggag
gaggagttgttgaagatttcctctacggtagacactcgcaaaaatggcttatccgaattc
ttccacgaccgcctcaaagtctatctccgcgatcaaggcatccgccacgacgtgatcgac
gcgtgcatcgccatgccgggcaatgatgacctgacattgctggtcaaacgggccaaggcg
ctgtccgatgtggtcgggaccgaggatggagaaaacctgatccagggcttcaagcgggcc
aacaacatcctgacgcaggcgcaggaggcggatggggtcgaatactcctacggcgcggac
gccaaattcgccgaaaccgacgaagaacgcgcgctgttcaaagcgctggacaccgctgag
gcgatcatcaccccggcgatgaaatccgaagactttgccaccgccatgtccgccatggcc
acactgcgcgcgccgattgatgcgttttttgaggcggtgcaggtcaattctgacaaccct
acagtccggcgcaacaggctcaacctgctcaatcggatcacgcagatctgcctgtcagtt
gcggatctgacccggatcgagggctga
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