Roseobacter denitrificans: RD1_2032
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Entry
RD1_2032 CDS
T00376
Symbol
pccA
Name
(GenBank) propionyl-CoA carboxylase, alpha subunit
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00280
Valine, leucine and isoleucine degradation
rde00630
Glyoxylate and dicarboxylate metabolism
rde00640
Propanoate metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00373
Ethylmalonyl pathway
rde_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_2032 (pccA)
00640 Propanoate metabolism
RD1_2032 (pccA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD1_2032 (pccA)
Enzymes [BR:
rde01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
RD1_2032 (pccA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
RimK
ATPgrasp_ST
ATP-grasp_3
GARS_A
Biotin_lipoyl_2
DUF2118
ATP-grasp_5
GCV_H
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
ABG31635
RoseoBase:
RD1_2032
UniProt:
Q168F8
LinkDB
All DBs
Position
1940087..1942132
Genome browser
AA seq
681 aa
AA seq
DB search
MFNKILIANRGEIACRVIKTARKMGITTVAIYSDADRQALHVQMADEAVHIGPPPANQSY
IVIDKVMEAIKSSGAQAVHPGYGFLSENAKFAQALEAAGVAFVGPPVGAIEKMGDKITSK
KIAKEAGVSTVPGYMGLIEDAEDAVKISNEVGYPVMIKASAGGGGKGMRIAWNDDEAREG
FQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDTHGNGIYLGERECSIQRRNQKVVE
EAPSPFLDEATRKAMGEQAVALAQAVGYASAGTVEFIVDGDKNFYFLEMNTRLQVEHPVT
ELITGVDLVEQMIRVANGEKLSITQDDVTLTGWAIENRLYAEDPYRGFLPSIGRLTRYRP
PAEVAAGPLLEQKTWQGDAPAGDMAVRNDTGVYEGGEISMYYDPMIAKLCTWAPTRAEAI
EKMRVALDSFEVEGIGHNLPFLSAVMDHPKFVSGDMTTAFIAEEYPDGFEGVDLPEAELR
RIAAACAAMHRVAEIRRARVSGRMDNHERKVGSDWNAHLQGHSFDLKIDADQDGATVLFE
DAARLRVSGSWTPGDQLAEMTVADAPLILKVGKVSGGFRIRTRGADLKVHIRTPRQAELA
RKMPEKLPPDTSKMLLCPMPGLMVKLDVAVGDEVQEGQALCTIEAMKMENILRAERKGVV
TKVNADAGDSLAVDDVIMEFE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagatcctgattgccaaccgcggagaaattgcctgtcgtgtcatcaagacc
gcgcggaagatgggtataacaaccgttgcgatctattccgatgcggatcggcaagccttg
catgtccagatggcggatgaagcggtgcatatcggaccgcctcctgcaaaccagtcctac
atcgtgattgacaaggtcatggaggcgatcaaatccagcggggcgcaggcggtgcatccg
ggttatggcttcttgtccgaaaacgccaaattcgcgcaggcgcttgaggcggcgggtgtt
gcctttgttggcccgcctgtcggggccatcgaaaagatgggtgacaagatcacgtcgaaa
aagatcgcgaaggaggccggggtgagcaccgtgccgggctatatgggcctgatcgaggac
gcagaggatgcggtcaaaatctcgaatgaagttggctacccggtgatgatcaaggcctcg
gcgggcggcggcggcaagggcatgcggatcgcctggaatgacgatgaggcacgcgaggga
tttcagtcgtccaagaacgaggcggcgaactcctttggcgatgaccgcattttcatcgag
aaattcgtcacgcagccgcgccacatcgaaattcaggtgctctgtgatacccatggcaat
gggatttatctgggcgagcgggaatgttcgatccagcgccgcaatcagaaagtcgtcgaa
gaagccccaagcccgtttctggatgaggccacccgcaaagccatgggcgaacaggcggtc
gccttggcgcaggcggttggctatgcctccgcaggaacggttgagtttatcgtggatggg
gacaagaacttctatttcctcgaaatgaacacgcggttgcaggtggagcatccggtgacc
gaattgatcaccggtgtcgatctggtcgaacagatgatccgcgtggccaatggcgaaaag
ctgtcgatcacgcaggacgatgtcacgctgacgggctgggcgattgaaaaccgactttat
gccgaagacccctatcgcggattcctgccctccatcgggcggctgacgcgctatcgcccg
cctgcagaagtcgcggcaggtccgctgctagagcagaaaacatggcagggggatgcacca
gcgggcgatatggccgtgcgcaatgataccggcgtctatgagggcggcgagatcagcatg
tattacgacccgatgatcgccaagctctgcacttgggcgccgacgcgggcagaagccatt
gagaagatgcgcgttgcgctggacagtttcgaggtggaaggcatcgggcataacctgccg
ttcctgtcggcggtcatggatcatccaaagttcgtgtcgggggatatgaccacggccttt
atcgccgaggaataccccgatggctttgaaggggtcgacttgccggaggccgagttgcgc
cgcattgcagcggcctgtgcggcgatgcaccgggtggctgaaatccgtcgtgcgcgggtg
tccggccgcatggacaaccacgagcgcaaagtgggcagcgactggaacgcgcatctgcag
ggccattcgtttgacctcaagattgacgcggatcaggacggtgcaacagtattgttcgag
gatgccgcgcgcctgcgtgtgtccggctcatggacgccgggcgatcaattggcggaaatg
acagtcgcggatgcgccgttgatcctgaaggttggcaaggtgtcgggcggttttcgcatc
cgcacccgtggcgcggacctcaaggtccatattcgcacaccccgtcaggcggaactggcc
cgcaagatgcctgagaaactgccgcccgatacatcgaaaatgctgctctgcccgatgccg
ggtctgatggtcaaactggatgtcgccgtcggcgacgaggtgcaggaaggtcaggcgctg
tgcacaatcgaagcgatgaagatggagaacatcctgcgcgccgaacgcaagggagtcgtg
accaaggttaatgccgatgcgggcgacagcctcgcggtagatgatgtgatcatggagttc
gaataa
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