KEGG   Roseobacter denitrificans: RD1_2057
Entry
RD1_2057          CDS       T00376                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rde03032]
    RD1_2057 (parE)
   03036 Chromosome and associated proteins [BR:rde03036]
    RD1_2057 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rde02048]
    RD1_2057 (parE)
Enzymes [BR:rde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RD1_2057 (parE)
DNA replication proteins [BR:rde03032]
 Prokaryotic type
  DNA Topoisomerases
   RD1_2057 (parE)
Chromosome and associated proteins [BR:rde03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RD1_2057 (parE)
Prokaryotic defense system [BR:rde02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RD1_2057 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: ABG31659
RoseoBase: RD1_2057
UniProt: Q168D4
LinkDB
Position
complement(1962765..1964813)
AA seq 682 aa
MTACARRHGLFPKRRLCHTHGQTNTKKSSGMNDLLSSGTEATDYDASSIEVLEGLEPVRK
RPGMYIGGTDERALHHLVAEVLDNSMDEAVAGHATRIEVELHEDYAITIRDNGRGIPIDP
HPKFPDKSALEVILCTLHAGGKFSGKAYETSGGLHGVGASVVNALSDSMVVQVARNKQLF
EQRFSRGVPLGPVQELGPTQNRRGTTVTFHADAEIFGAHRFKPARLFNSIRSKAYLFSGV
EIRWKSAIADGDTPQEATFHFPGGLSDYLRETLGTATTYADNPFAGSVDFKEKFGEPGKV
EWAINWTPSRDGFIQSYCNTVPTPEGGTHVAGFWAAILKGIKAYGELSNTKKAAQITRED
LTSGGCALVSCFIAEPAFVGQTKDRLSTEAAAKMTEGAVRDHFDNWLAADTKSAGAILDF
LVLRAEERLRRRQEKETARKSATKKLRLPGKLTDCTSKDRAGTELFIVEGDSAGGSGKGA
RNRNTQALLPLKGKILNVLGAASSKLGTNAEISDLCEALGCGMGTKFNLDDLRYEKIIIM
TDADVDGAHIAALLMTFFYTQMRPLIDAGHLYLACPPLFRLTQGAKRVYCLTEEEKNDWL
EKGLGGKGKIDVSRFKGLGEMDAKDLKETTMDPTTRKLIRVSIDEDVPGETGDLVERLMG
KKPELRFQYIQENAKFVEELDV
NT seq 2049 nt   +upstreamnt  +downstreamnt
gtgacggcatgcgcgcggcgacacggtcttttccccaagcggcgcctctgccatactcat
ggtcaaaccaacacaaaaaagagcagcggtatgaatgaccttctttcctcggggaccgag
gccacagattatgatgcgtcttccattgaggtgctcgagggtctcgaacccgtacgcaag
cgccccggcatgtatatcggcggcacggatgaacgcgcgttgcaccatctggtggccgaa
gtgctcgacaactcgatggatgaggccgtcgccggtcacgccacaaggatcgaggtcgag
ttgcacgaggattacgccatcaccatccgcgacaatggccgtggcatccccatcgacccg
cacccgaaattccccgacaaatccgcacttgaggtgatcctttgcacgctgcatgcgggg
ggtaaattttccggcaaggcttacgagacatcgggcggtttgcacggcgtcggggcttcg
gtggtgaatgcgctcagcgacagtatggtggtgcaggtcgcgcgcaacaaacaactcttt
gagcaacggttttcgcgcggcgtgccgcttggccccgtgcaggaactgggcccgacgcag
aaccggcgcggcacgacggtgaccttccatgcggatgccgaaatcttcggcgcacaccgc
ttcaaacctgcgcggctgttcaattccatccgctccaaggcctatctgttttccggcgtc
gaaatccgctggaaatctgccatcgcggatggcgacaccccgcaggaggcgacgttccac
ttccccgggggcctgtcggattatctgcgcgaaaccctcgggactgctaccacctatgcc
gacaacccctttgccgggtccgttgatttcaaagagaaattcggcgaaccgggcaaggtt
gaatgggccatcaactggacaccctcacgcgatgggttcatccagtcctactgcaacacc
gtccccacgcccgaagggggcacccatgtggccgggttctgggctgcgatcctcaagggt
atcaaggcctatggtgagttgtccaacaccaagaaggccgcgcagatcacgcgtgaagac
ctgacatccggcggctgcgcgctggtgtcctgcttcattgccgaacccgcctttgtcggg
cagaccaaggaccgtttgtccactgaagccgccgcgaaaatgaccgaaggggccgtgcgc
gatcattttgataactggttggcggcggatacgaaatccgccggggcgatcctcgatttt
ctggtgctgcgcgccgaagaacgcctgcgtcgccgtcaggaaaaggaaaccgcgcgcaaa
tcggccaccaagaaactgcgcctgcccggcaagctgaccgactgcacttcaaaggatcgc
gccggcacggaactgttcatcgtggagggcgacagcgccggcggctccggcaagggtgcg
cgcaaccgcaacacgcaggcgctcctgccgctcaagggcaagatcctgaacgtgctgggg
gcggcgtcgtcaaaactgggcaccaacgccgaaatctcggacctgtgcgaagcgcttggc
tgtggcatgggcaccaaattcaacctcgatgatctgcgctatgaaaagatcatcatcatg
accgacgcggatgtggatggcgcccatatcgcggccctgctgatgacgttcttctacacc
cagatgcggccgctgatcgacgcgggccacctctatctggcctgcccgcccctgttccgg
ctgactcaaggggccaaacgcgtctactgcctgacggaggaggaaaagaacgactggctg
gaaaaaggtctgggcggcaagggcaagatcgacgtctcgcgcttcaagggcctgggcgaa
atggacgccaaggacctcaaggaaaccactatggaccccacgacccgcaaactcatccgc
gtgtcaatcgacgaggacgtaccgggcgagacgggcgatctggtggagcgtttgatgggc
aagaaacccgaactgcgcttccagtatattcaggaaaacgcgaagtttgtggaggagttg
gatgtttga

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