Roseobacter denitrificans: RD1_2136
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Entry
RD1_2136 CDS
T00376
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00190
Oxidative phosphorylation
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RD1_2136 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_2136 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rde01006
]
RD1_2136 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rde03029
]
RD1_2136 (ctaB)
Enzymes [BR:
rde01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
RD1_2136 (ctaB)
Prenyltransferases [BR:
rde01006
]
Compound prenylation
Protoheme farnesyltransferase
RD1_2136 (ctaB)
Mitochondrial biogenesis [BR:
rde03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RD1_2136 (ctaB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABG31732
RoseoBase:
RD1_2136
UniProt:
Q167W1
LinkDB
All DBs
Position
2035664..2036608
Genome browser
AA seq
314 aa
AA seq
DB search
MADVGYTSSPAAKEYEAQLGDYFALLKPRVMSLVVFTALVGLQAAPVSVHPVIGFASILF
VAIGAGASGALNMWWDADIDAVMRRTANRPIPAGRVQPGEALNLGAALSGLSIMMLALTA
NFLAAGLLAFTIFFYAVIYSMWLKRWTPQNIVIGGAAGAFPPVIGWVIATGSLSIEAWLM
FALIFMWTPPHFWALALFMKSDYDDAGVPMLTVTHGRKKTRAHIIAYTVLLAVLAVGTGF
SAIGGPVYLAAALVLNALFLKGAIDIWRRDEDTAIADEYRVEKKFFRLSLWYLFAHFGAI
LLESALRPFGLGGW
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtaggatatacatcttccccggcggcgaaggaatatgaagcgcagcttggc
gactatttcgcgttgctcaagccgcgcgtcatgtcgctggtggtcttcactgcgcttgtc
ggcttgcaggccgcgcctgtgtctgtgcaccctgtcatcggctttgcatcaatcctgttt
gtggccatcggtgcaggggcgtccggcgcgctgaatatgtggtgggatgcggatattgac
gctgtgatgcgccgcacggccaaccgcccgatccctgctggccgcgtccagccgggcgaa
gcgctgaaccttggcgctgccttgtcgggcctttcgatcatgatgctggcgctgacggcc
aattttctggcggcggggctgctggccttcacgatattcttttacgcggtgatctattcc
atgtggctgaaacgctggacacctcagaacatagtgatcggtggtgccgcgggggccttt
ccgccggtcatcggctgggtcatcgccacggggagcctgtcgattgaggcgtggttgatg
tttgcgctgatcttcatgtggacgccgccgcatttctgggcgctggcgctgttcatgaag
tctgattacgacgacgccggtgtcccgatgctgacggtgacccatgggcgcaagaaaacc
cgcgcgcatatcatcgcctataccgtgctgcttgccgtgcttgcggtcgggacgggcttc
agcgcgatcggcgggccggtctatcttgcggcggcgctggttctgaatgcactgttcctc
aagggcgcaatcgacatctggcggcgcgatgaagacactgccatcgcggatgaataccgg
gttgagaaaaagttcttccggctgtcgctgtggtacttgttcgcgcatttcggggccatc
ctgctggaatcggcgctgcgcccctttggtttgggaggctggtaa
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