Roseobacter denitrificans: RD1_2218
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Entry
RD1_2218 CDS
T00376
Name
(GenBank) sensory box/GGDEF family protein, putative
Organism
rde
Roseobacter denitrificans
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Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABG31810
RoseoBase:
RD1_2218
UniProt:
Q167N3
LinkDB
All DBs
Position
complement(2119485..2121842)
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AA seq
785 aa
AA seq
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MRWSRGETHELTDQHGTSHSVPGDFSGKAYCLHSGGMEALRMTQQNTVPIHRDPDQSLHL
ANVSALQRFRILDSAPEAAFDHIVEIASRVFSVPIVLVSLIDLNRQWFKAKVGLELCETN
LDVSFCTYAVRQNDVMVIPDATKDARFANNELVRGPDGIRFYAGAPLRTADGFVVGTLCL
VDGVPHLDFGSEDRALLAKLAVLVVDLMEGRASHQASLEAKSKLEDFTTASLDIFWETDV
EHRFTRLSSETMPGMSASANPWDSGLESMVGHKRWDILKVDTTREPWRSHLKLLEARKPF
RDLRYAKEFDGKLMYFSVSGRPVFDKDGAFLGYRGATQNVTEQEQSRLEAERLANSDPLT
GLANRRCWNAALRERLNADEIPPTGILLFDVDRFKDINDALGHAVGDRLLIEIAKRIVNC
SLKTSLAARLGGDEFALMIEGKNKDTVRSADCILQAMKQPFEIDGHNLHVELSIGIKLVG
TREFECDRIMVDADLALRTAKMQGRSRHVVYEPSMRKENDSRITLTAQFERALQNNEFEL
HFQPQIRLSNDTVVGVESLLRWNHPERGLLFPNQFLNALETSAYDIPAGQQVIDLACKQA
RIWQDLGTPVRVGINVSASQLYGDNLPKVLNDAMTRHGTAPALIEVEVTERVALGNVEKI
TSVLEAIRDLGVTIAFDDFGTGFASLSSLMQFPLDRVKVDQRFITDLHKNPANTRLTSGL
IRLCHSLGFEVIAEGVEKHAHETFLRKQNCDEVQGYLYSKPVSAQKTTDFLIKGKHAQTR
RKQAG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggagcagaggggaaacgcatgagctcacagatcagcacggcacatcgcatagt
gttcccggtgatttttccggcaaggcgtactgcctgcattctggcggcatggaggcattg
cgcatgacacaacagaacactgtcccgatccaccgcgaccccgatcaatcacttcatctc
gcaaatgtgtcggcgctgcagcggtttcgcattctcgacagcgcacccgaagcagccttc
gatcatattgttgaaattgcctcgcgtgttttttcggttcctattgttctcgtctccttg
atcgatctcaaccgacagtggttcaaggccaaggttggcttggaattatgcgagacaaac
cttgatgtctccttttgcacctacgccgtgcgccagaacgatgtgatggtcattcctgat
gcgaccaaggacgcccgctttgcaaataacgaacttgtcaggggaccagacggcattcgt
ttttatgcgggtgcgccactgcgcaccgccgacggttttgttgtggggacattatgtctg
gttgatggggttccacatctggactttgggtccgaagaccgcgcactccttgcgaaactg
gcggttcttgttgtcgacctgatggaagggcgcgccagccatcaggcgagtttggaggcg
aaaagcaaactggaggatttcacaaccgcatcactcgatattttctgggaaacagatgtc
gagcatcggtttacccgtttgtcttccgaaacaatgcccggcatgtcggccagcgccaac
ccctgggactcagggctggaaagcatggtgggccataaaagatgggacatcctgaaggtg
gatacgacgcgcgagccctggcgttctcacctgaaacttctggaagctcgcaagcccttt
cgagatttgcgctatgccaaggagtttgacggcaaactcatgtatttttcggtaagcgga
cgaccggttttcgacaaggacggtgcatttcttggctaccgaggcgcgacgcagaatgtc
accgaacaagagcaatcgagacttgaggcggaaaggttggccaattcggacccgctgacg
ggccttgccaaccgccgctgttggaacgcggccctgcgcgagcgtctcaacgcggatgag
atacccccgacgggcattttgctgttcgacgtggatcggttcaaggacataaatgacgcg
ctcgggcatgccgtcggtgatcgcctgctgatcgaaatcgccaagcgtattgtgaattgt
tcgctgaaaacatcgctcgccgcgcgccttggcggggatgagttcgctttgatgatagaa
ggcaagaacaaagatacggtgcgttcagccgattgcatcttgcaggcgatgaaacagcct
ttcgaaattgacgggcacaatctgcatgtcgagctttcgatcgggataaaactggttgga
acgcgcgaatttgaatgcgacaggatcatggtcgacgcggacctcgcattgcgaacggcc
aagatgcaaggccgcagtcggcatgtcgtttatgaaccgagcatgcgcaaagagaatgac
agccgcataacgctcaccgcacaattcgagcgcgcattgcagaataacgaattcgagctg
cattttcagccgcagatacgtctttcaaacgatactgtcgtcggtgtcgagagcctgctg
cggtggaaccatccggaacgcgggttattgtttcccaatcagtttctgaacgcacttgaa
acatctgcatatgacattcccgcaggccagcaagtgatcgaccttgcctgcaaacaagcg
cggatctggcaggatttgggcacgccagtgcgggtcgggatcaatgtatcggccagccag
ctttacggggacaacctgccgaaggtcctgaatgacgcaatgacccggcatggcacagca
cccgctttgatcgaggttgaggtcaccgagcgcgtcgcgcttggcaacgtggagaaaatc
acctcagtgcttgaagccatacgcgacttgggcgttacgattgcctttgatgacttcgga
accggctttgcatctctgagttctttgatgcaattcccgctggaccgggtcaaagtcgac
cagcggttcattaccgatcttcacaagaatccggccaacacgcggctgacaagcggtctg
atacgcctgtgccatagcctcggttttgaagtcatcgccgagggtgtggaaaagcacgcg
catgaaacctttctgcgcaaacagaattgcgacgaggtacaggggtatctgtacagcaaa
ccggtaagtgcgcagaaaacgacagatttcctgatcaaaggaaaacatgcgcaaacacga
aggaagcaggcaggctga
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