Roseobacter denitrificans: RD1_2221
Help
Entry
RD1_2221 CDS
T00376
Name
(GenBank) oligopeptide ABC transporter, ATP-binding subunit
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_2221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2221
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RD1_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
AAA_29
SMC_N
RsgA_GTPase
AAA_16
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ABG31813
RoseoBase:
RD1_2221
UniProt:
Q167N0
LinkDB
All DBs
Position
complement(2122596..2123558)
Genome browser
AA seq
320 aa
AA seq
DB search
MSLISVKSLTRVFDVSKPWLNRVLERRPKSLLTAVSEVDFEVAARSTYALVGESGSGKST
IGRMLVGLLTPTSGTVEINGVNLVRETDAGKIDAIRSDIQMIFQDPFASLNPRWRVRDII
VEPVVARGGNADGLAEKLLEQVGLSALDAGKFPHEFSGGQRQRICIARALSSEPKLIVCD
EPTSALDVSVQAQVLNLMSDLKDNFGLTYVLISHDLTVVQHMADRIGVLYLGRLVEEASP
EDLFATPKHPYTQMLLDAAPSMTAIGREATLPEGEIPDPINPPTGCAFHPRCPLATDICK
TERPAMRHLNQSRVACHLAE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgatttccgtcaaatccctcacccgtgtctttgacgtctcaaagccctggttg
aaccgcgtgctggaacggcgcccgaaatccctgctgacggccgtctcggaggtggatttc
gaagtcgcggcacgcagcacctatgcgcttgtcggcgaaagcggctccggcaagtccacc
atcgggcgcatgctggtcgggcttttgacccccacctccgggaccgtcgaaatcaacggc
gtcaaccttgtccgggaaacggacgcgggcaagattgatgcgatccgctctgacatccag
atgattttccaggaccctttcgcctcgctcaacccgcgctggcgggtgcgcgacatcatc
gtggaaccggttgtggcgcggggcggtaacgcggacggtctggcggagaagctgctggag
caggtggggctgtccgctctggatgcgggcaaattcccccatgagttttcgggaggtcag
cgccagcgcatatgtattgcacgcgccctgtcatccgaacccaaactgatcgtctgcgat
gagccgacatcggcacttgatgtctccgttcaggcgcaggttctgaacctgatgagcgat
ctcaaggataacttcggcctgacctatgtgctgatcagccatgatctgacggttgtgcag
catatggcggatcgcatcggtgtgctttacctcggtcgtcttgttgaagaagccagccct
gaggatctgtttgccacccccaaacacccctatacgcaaatgctgctcgacgccgcgccc
agcatgaccgccatcggtcgcgaggccaccctgcccgagggagagatacccgaccccatc
aacccgccaaccggatgcgcctttcatccgcgctgcccgcttgcaaccgacatctgcaaa
acagagcgcccggccatgcggcacctgaatcaatcccgcgtggcctgccatctggcggaa
tga
DBGET
integrated database retrieval system
