Roseobacter denitrificans: RD1_2304
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Entry
RD1_2304 CDS
T00376
Symbol
hmrR
Name
(GenBank) HTH-type transcriptional regulator hmrR, putative
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_2304 (hmrR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rde01504
]
RD1_2304 (hmrR)
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RD1_2304 (hmrR)
Antimicrobial resistance genes [BR:
rde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
RD1_2304 (hmrR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
CEP209_CC5
Cauli_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
ABG31884
RoseoBase:
RD1_2304
UniProt:
Q167F9
LinkDB
All DBs
Position
2201200..2201601
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AA seq
133 aa
AA seq
DB search
MNIAEVSRVSGLPTKTIRYYEDIGLVTPARRANGYRDFSAQDGHKLAFLGRSRSLGFSIE
ECRTLLSLYEDRDRASADVKSVAAKHLERVAKKIKELEAMKSTLETLVTRCHGDDRPDCP
ILNDLAGGEGATA
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcagaggtgtcgcgcgtcagtggattgccgacaaagaccatcagatactac
gaagacatcggccttgtgacgccagcgcgcagggccaacggttatcgcgatttcagcgcg
caggacgggcacaagctggcctttctcgggcggtcgcgctcgctcggcttctctattgag
gaatgccgcacgcttttgtcgctttacgaagaccgcgaccgcgccagcgccgacgtcaag
agcgttgccgccaaacatctggaacgtgtcgcgaaaaagataaaggaactggaggcgatg
aaatcgacactcgaaacgcttgtcacgcgctgtcacggggatgaccgcccggattgcccg
atcctgaatgatctcgctggtggtgagggggcaactgcatga
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