Roseobacter denitrificans: RD1_2330
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Entry
RD1_2330 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2330
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_2330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
YgjJ
Motif
Other DBs
NCBI-ProteinID:
ABG31906
RoseoBase:
RD1_2330
UniProt:
Q167D7
LinkDB
All DBs
Position
2224792..2228409
Genome browser
AA seq
1205 aa
AA seq
DB search
MRYLLIIAVTLTCLPLSLVAQEDEDDGGFLTRTIEGALSGAGREVNIVGFAGALSSEATF
ETMTIADAEGIWLTLEEVSLIWSRTALLRGRLKVDSLTASSLKVARLPIAEEQPVEIPPA
EAEEFSLQLPELPVSINIDAFEVSEIDLGEPILGVAARLSLKARARLDDDGLFLDLTADR
IDEVAGTFALRTNVERDGAEIDLNLTLSEAADGITAQLLNLPDKPSVDLSVAGLGPLDDF
TADIALSTAGQPRLAGQVSLRAEESAVVDAGPDRRIRADLGGDITALIAPEYQDFFGPDV
GLKLDTLLVADGSVDVQDFSIDAQAVDLAGKVRLNSDMWPSFVDVKGLIAQDDGDVVLPG
SDAGVTVSAIGLDISFDETAGDVFTGVFDIDNLQHSAAQVARLELVLDGTLDGSVDSIGR
FATDLRLDATGVELSDENTAQALGDAINGFATITYVEDEPIEITDLSLAGPDFGLDGDVV
IEGLDGGFPTTLDLAVVTRDLSRFAGLAGRPLSGAADLSVAGRVVPLSSMFDLKIAGSAQ
DVIVDVPQADALLTGRTELSLGAARDATGTFLRDLSLQNDALDVTADAALRSMGSEVVAR
VRLSDVALVAPQYQGALSLDADASQSQAGWQIEAALDAPYDARAVVSGLATGPDADLNFD
VSIPEIQPLVPDAQGPVSAKGRLWQSTAGYQIDVKADVPFDGRLEVLGLATGPDAKVTFD
ASLPDMSVLVPDIGGPLALKGDLARAGEGWAVDTLLEGPAGMTATIAGTAAQDASTVDLD
IEGAVPLGLAAPFLAPRNLVGQAAFDLALQGAPSLEALSGQITSNGAQFSDPNLRLGLEN
LDTRVDLRSNTAQLDVGANFVTGGRVEVGGSVNLATLVGDLTIALRDALLLDPNLYAATI
GADINVDGPLTGGARIAGQIDLKEVNITVPGTGVTSIGAIPEIRHIGAPQRAAVTQAHAG
VLPKEEKQQSTDAPAFPLAIDINAPSKLFVRGRGINAEMGGDLSVRGDTNNIISSGSFDL
IRGRLDIIGKRFELDEGSIQFQGSVTPYIRFVTTTQTPEGTASITVDGLADEPDITFSAV
PEAPEDEVMSLILFGRYVSELSAFQALQLANGISQLSGRGGVNVLGGLRSGAGLDELDVT
TDEDGATSVSAGKYITDTIYTDVTNNSDKGTDISLNIDLTSDLKGKATVAEDGDSSVGFF
FERDY
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgagatacctgctgatcattgctgtcaccctgacatgtttgccgctctcgctcgtggcg
caagaggatgaggatgacggtggctttctgacccgcacgatcgagggtgcgctgtcgggg
gccggacgcgaggtgaacatcgttggttttgccggcgcgctgagttccgaggcgacgttc
gagaccatgacgatcgccgatgccgaaggcatctggctgacgctggaagaggtatcgctg
atctggagccgcaccgcactgctgcgcggacgtctcaaggtcgacagcctgaccgcaagt
tccctgaaggtggcacgcttgcccatcgcagaagagcaacccgttgagatcccacccgcc
gaggcggaagagttcagcctgcaattgcctgaattgcctgtgtcgatcaacattgatgcc
tttgaagtgtctgaaattgatctgggagagcccattctgggggtggcggcgcgactgtcc
ctcaaagcgcgcgcgcggctggatgatgacgggctgtttctggacctcacggctgaccgt
atcgacgaggtcgcaggtacattcgccctgcgcacaaatgtggagcgggatggcgcggag
attgacctcaacctgaccctgtccgaagcggcggatggcattacggcgcaattgctcaac
ctgccggacaaaccatcggtggatctgagcgtcgccggtcttggcccgctggatgacttt
accgctgatatcgcgttatcgaccgcagggcagccgcgtctcgccgggcaggtctccttg
cgcgccgaagaaagcgctgtggttgatgccggtcctgaccgccgcatccgcgctgatctc
gggggcgatatcaccgccttgatcgcaccggagtatcaggatttctttggccccgacgtg
gggctgaaactggacacgcttctggtggcggatggttccgttgatgtgcaggactttagc
atcgacgcgcaggccgttgatcttgctggtaaagtgcgacttaacagtgacatgtggccg
agctttgtcgacgtcaagggtttgattgcgcaggatgatggggatgttgtcctgccgggg
tcggatgcgggtgtcacggtcagtgccatcgggctggatatctcatttgacgagacggca
ggggatgtattcacgggtgtgtttgacatcgacaatctgcaacactcggcggcacaggtt
gcgcgcctcgaactggtgctggatggcacgctcgatggcagcgtggacagcatcggccgc
tttgccaccgatctgcggcttgatgcgacgggcgtggaactgagcgatgagaacacggcg
caggccttgggtgatgcgataaacggctttgccacgatcacgtatgtcgaggatgaaccc
atcgagatcaccgacctttcgctggctggtcccgatttcggactggatggcgacgtggtg
atcgaagggttggacggcggctttcccaccacccttgatctggccgtcgtgacgcgggat
ttatcgcgttttgccggtcttgccgggcgacccttgagcggggcggcggatctgtcggtt
gccgggcgcgttgtgccattgtccagcatgttcgacctcaagatcgcgggctccgcacag
gatgtgatcgtcgatgtcccgcaggcagacgccctgctgacaggtcgcacagagttgtca
ctgggtgcggcacgtgatgccacggggacattcctgcgcgacttgtcgctgcaaaatgat
gcattggatgtgacggccgatgccgcgctgcgcagcatgggcagtgaggtggtcgcgcgg
gtcaggctgtcggatgttgcgttggtcgcaccacagtatcagggagcgttgtcgcttgat
gcggatgcaagccagtcacaggcaggttggcagatcgaagccgcgctcgatgcgccctat
gatgcgcgcgcggtggtttcggggcttgcgaccggtccggacgccgacctgaactttgac
gtctcgatcccggaaatccagccgcttgtgccggatgcgcaggggccggtttctgcaaag
gggcggctttggcagtccaccgccggctatcagatcgacgtcaaggcggatgtgcccttt
gacgggcggcttgaggttctgggccttgccacggggcctgacgcgaaagtcacctttgac
gccagcctgcccgatatgagcgttctggtccctgatatcggcggacctctggcgctgaaa
ggcgatctggcccgcgcgggcgaagggtgggcggtggatacgctgctcgaagggccggcg
ggaatgaccgcgacgattgcaggcactgctgcacaggacgcgagcacggttgatctggac
atcgagggggcagtgccgcttggtctggccgcgccattccttgcaccgcgcaacctcgtg
gggcaggcggcctttgacctcgccctgcaaggcgcgccatcgctggaggcgctgagcggg
cagatcaccagcaacggggcgcagttttctgacccgaacctgcgtcttgggctggaaaat
ctggatacccgtgtcgatttgcgcagcaataccgctcagctggacgtgggggcgaatttc
gtgaccggtggccgggtcgaagtcggtggctcggtcaatctggccactcttgtgggcgat
ctcacgattgccttgcgcgacgcgctgctgctggatcccaacctctatgccgcaaccatc
ggtgcggatatcaacgttgacgggccattgacgggcggggcgcggattgccgggcagatt
gacctgaaagaggtcaatattaccgtaccgggcactggtgtgacctccatcggcgcgatc
cctgaaatccgtcacatcggcgcaccgcagcgcgccgctgtgacccaggcccatgcgggc
gtgttgccaaaggaagagaaacagcaaagcaccgacgcgcctgcatttcccctcgccatc
gacatcaatgcgccgtcaaaactctttgtgcgcgggcgtgggatcaacgccgaaatgggc
ggcgatctgtcggtgcgcggggataccaacaacatcatctcatcaggcagtttcgatctg
atccgggggcgtctggatatcatcggcaagcggtttgaactggacgaagggtcgatccag
tttcagggcagtgtgaccccttacatccgctttgtcacgaccacgcagacccctgaaggc
acggccagcatcaccgttgacggtctggcggatgagccggatatcaccttcagcgccgtg
cccgaggccccggaagacgaggtgatgtcgctgatcctcttcgggcgctacgtgtcggaa
ctgtcggcattccaggcgctgcaactggccaatggcatctctcagctttccgggcgtggc
ggcgtcaatgtgcttggcggtttgcgcagcggggccgggctggacgaattggatgtcacc
accgatgaggatggcgcgacctccgtgtcggcggggaaatacatcacggatacgatttat
acggatgtgaccaacaacagcgacaagggcacggatatctcgctgaacatcgatctgacc
agcgacctcaaaggcaaggcgaccgtggctgaggatggcgacagcagtgtgggcttcttt
ttcgaacgggattattga
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integrated database retrieval system