KEGG   Roseobacter denitrificans: RD1_2330
Entry
RD1_2330          CDS       T00376                                 
Name
(GenBank) conserved hypothetical protein
  KO
K09800  translocation and assembly module TamB
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rde02000]
    RD1_2330
Transporters [BR:rde02000]
 Other transporters
  Pores ion channels [TC:1]
   RD1_2330
SSDB
Motif
Pfam: TamB TamB_N YgjJ
Other DBs
NCBI-ProteinID: ABG31906
RoseoBase: RD1_2330
UniProt: Q167D7
LinkDB
Position
2224792..2228409
AA seq 1205 aa
MRYLLIIAVTLTCLPLSLVAQEDEDDGGFLTRTIEGALSGAGREVNIVGFAGALSSEATF
ETMTIADAEGIWLTLEEVSLIWSRTALLRGRLKVDSLTASSLKVARLPIAEEQPVEIPPA
EAEEFSLQLPELPVSINIDAFEVSEIDLGEPILGVAARLSLKARARLDDDGLFLDLTADR
IDEVAGTFALRTNVERDGAEIDLNLTLSEAADGITAQLLNLPDKPSVDLSVAGLGPLDDF
TADIALSTAGQPRLAGQVSLRAEESAVVDAGPDRRIRADLGGDITALIAPEYQDFFGPDV
GLKLDTLLVADGSVDVQDFSIDAQAVDLAGKVRLNSDMWPSFVDVKGLIAQDDGDVVLPG
SDAGVTVSAIGLDISFDETAGDVFTGVFDIDNLQHSAAQVARLELVLDGTLDGSVDSIGR
FATDLRLDATGVELSDENTAQALGDAINGFATITYVEDEPIEITDLSLAGPDFGLDGDVV
IEGLDGGFPTTLDLAVVTRDLSRFAGLAGRPLSGAADLSVAGRVVPLSSMFDLKIAGSAQ
DVIVDVPQADALLTGRTELSLGAARDATGTFLRDLSLQNDALDVTADAALRSMGSEVVAR
VRLSDVALVAPQYQGALSLDADASQSQAGWQIEAALDAPYDARAVVSGLATGPDADLNFD
VSIPEIQPLVPDAQGPVSAKGRLWQSTAGYQIDVKADVPFDGRLEVLGLATGPDAKVTFD
ASLPDMSVLVPDIGGPLALKGDLARAGEGWAVDTLLEGPAGMTATIAGTAAQDASTVDLD
IEGAVPLGLAAPFLAPRNLVGQAAFDLALQGAPSLEALSGQITSNGAQFSDPNLRLGLEN
LDTRVDLRSNTAQLDVGANFVTGGRVEVGGSVNLATLVGDLTIALRDALLLDPNLYAATI
GADINVDGPLTGGARIAGQIDLKEVNITVPGTGVTSIGAIPEIRHIGAPQRAAVTQAHAG
VLPKEEKQQSTDAPAFPLAIDINAPSKLFVRGRGINAEMGGDLSVRGDTNNIISSGSFDL
IRGRLDIIGKRFELDEGSIQFQGSVTPYIRFVTTTQTPEGTASITVDGLADEPDITFSAV
PEAPEDEVMSLILFGRYVSELSAFQALQLANGISQLSGRGGVNVLGGLRSGAGLDELDVT
TDEDGATSVSAGKYITDTIYTDVTNNSDKGTDISLNIDLTSDLKGKATVAEDGDSSVGFF
FERDY
NT seq 3618 nt   +upstreamnt  +downstreamnt
ttgagatacctgctgatcattgctgtcaccctgacatgtttgccgctctcgctcgtggcg
caagaggatgaggatgacggtggctttctgacccgcacgatcgagggtgcgctgtcgggg
gccggacgcgaggtgaacatcgttggttttgccggcgcgctgagttccgaggcgacgttc
gagaccatgacgatcgccgatgccgaaggcatctggctgacgctggaagaggtatcgctg
atctggagccgcaccgcactgctgcgcggacgtctcaaggtcgacagcctgaccgcaagt
tccctgaaggtggcacgcttgcccatcgcagaagagcaacccgttgagatcccacccgcc
gaggcggaagagttcagcctgcaattgcctgaattgcctgtgtcgatcaacattgatgcc
tttgaagtgtctgaaattgatctgggagagcccattctgggggtggcggcgcgactgtcc
ctcaaagcgcgcgcgcggctggatgatgacgggctgtttctggacctcacggctgaccgt
atcgacgaggtcgcaggtacattcgccctgcgcacaaatgtggagcgggatggcgcggag
attgacctcaacctgaccctgtccgaagcggcggatggcattacggcgcaattgctcaac
ctgccggacaaaccatcggtggatctgagcgtcgccggtcttggcccgctggatgacttt
accgctgatatcgcgttatcgaccgcagggcagccgcgtctcgccgggcaggtctccttg
cgcgccgaagaaagcgctgtggttgatgccggtcctgaccgccgcatccgcgctgatctc
gggggcgatatcaccgccttgatcgcaccggagtatcaggatttctttggccccgacgtg
gggctgaaactggacacgcttctggtggcggatggttccgttgatgtgcaggactttagc
atcgacgcgcaggccgttgatcttgctggtaaagtgcgacttaacagtgacatgtggccg
agctttgtcgacgtcaagggtttgattgcgcaggatgatggggatgttgtcctgccgggg
tcggatgcgggtgtcacggtcagtgccatcgggctggatatctcatttgacgagacggca
ggggatgtattcacgggtgtgtttgacatcgacaatctgcaacactcggcggcacaggtt
gcgcgcctcgaactggtgctggatggcacgctcgatggcagcgtggacagcatcggccgc
tttgccaccgatctgcggcttgatgcgacgggcgtggaactgagcgatgagaacacggcg
caggccttgggtgatgcgataaacggctttgccacgatcacgtatgtcgaggatgaaccc
atcgagatcaccgacctttcgctggctggtcccgatttcggactggatggcgacgtggtg
atcgaagggttggacggcggctttcccaccacccttgatctggccgtcgtgacgcgggat
ttatcgcgttttgccggtcttgccgggcgacccttgagcggggcggcggatctgtcggtt
gccgggcgcgttgtgccattgtccagcatgttcgacctcaagatcgcgggctccgcacag
gatgtgatcgtcgatgtcccgcaggcagacgccctgctgacaggtcgcacagagttgtca
ctgggtgcggcacgtgatgccacggggacattcctgcgcgacttgtcgctgcaaaatgat
gcattggatgtgacggccgatgccgcgctgcgcagcatgggcagtgaggtggtcgcgcgg
gtcaggctgtcggatgttgcgttggtcgcaccacagtatcagggagcgttgtcgcttgat
gcggatgcaagccagtcacaggcaggttggcagatcgaagccgcgctcgatgcgccctat
gatgcgcgcgcggtggtttcggggcttgcgaccggtccggacgccgacctgaactttgac
gtctcgatcccggaaatccagccgcttgtgccggatgcgcaggggccggtttctgcaaag
gggcggctttggcagtccaccgccggctatcagatcgacgtcaaggcggatgtgcccttt
gacgggcggcttgaggttctgggccttgccacggggcctgacgcgaaagtcacctttgac
gccagcctgcccgatatgagcgttctggtccctgatatcggcggacctctggcgctgaaa
ggcgatctggcccgcgcgggcgaagggtgggcggtggatacgctgctcgaagggccggcg
ggaatgaccgcgacgattgcaggcactgctgcacaggacgcgagcacggttgatctggac
atcgagggggcagtgccgcttggtctggccgcgccattccttgcaccgcgcaacctcgtg
gggcaggcggcctttgacctcgccctgcaaggcgcgccatcgctggaggcgctgagcggg
cagatcaccagcaacggggcgcagttttctgacccgaacctgcgtcttgggctggaaaat
ctggatacccgtgtcgatttgcgcagcaataccgctcagctggacgtgggggcgaatttc
gtgaccggtggccgggtcgaagtcggtggctcggtcaatctggccactcttgtgggcgat
ctcacgattgccttgcgcgacgcgctgctgctggatcccaacctctatgccgcaaccatc
ggtgcggatatcaacgttgacgggccattgacgggcggggcgcggattgccgggcagatt
gacctgaaagaggtcaatattaccgtaccgggcactggtgtgacctccatcggcgcgatc
cctgaaatccgtcacatcggcgcaccgcagcgcgccgctgtgacccaggcccatgcgggc
gtgttgccaaaggaagagaaacagcaaagcaccgacgcgcctgcatttcccctcgccatc
gacatcaatgcgccgtcaaaactctttgtgcgcgggcgtgggatcaacgccgaaatgggc
ggcgatctgtcggtgcgcggggataccaacaacatcatctcatcaggcagtttcgatctg
atccgggggcgtctggatatcatcggcaagcggtttgaactggacgaagggtcgatccag
tttcagggcagtgtgaccccttacatccgctttgtcacgaccacgcagacccctgaaggc
acggccagcatcaccgttgacggtctggcggatgagccggatatcaccttcagcgccgtg
cccgaggccccggaagacgaggtgatgtcgctgatcctcttcgggcgctacgtgtcggaa
ctgtcggcattccaggcgctgcaactggccaatggcatctctcagctttccgggcgtggc
ggcgtcaatgtgcttggcggtttgcgcagcggggccgggctggacgaattggatgtcacc
accgatgaggatggcgcgacctccgtgtcggcggggaaatacatcacggatacgatttat
acggatgtgaccaacaacagcgacaagggcacggatatctcgctgaacatcgatctgacc
agcgacctcaaaggcaaggcgaccgtggctgaggatggcgacagcagtgtgggcttcttt
ttcgaacgggattattga

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