Roseobacter denitrificans: RD1_2379
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Entry
RD1_2379 CDS
T00376
Name
(GenBank) transcriptional regulator, IclR family, putative
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_2379
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RD1_2379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
HTH_20
HTH_24
DUF4148
HTH_23
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
ABG31949
RoseoBase:
RD1_2379
UniProt:
Q166Z4
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Position
complement(2268454..2269278)
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AA seq
274 aa
AA seq
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MHLDRLITILELIAMAGRGLSAVEVQKATGLPRPTCYRLLQTLAENRLIDDPGGSSRYVI
GERLIGIALLGQSDIDVRRVCAPVLREAALNLEDSVFLARLRSTDVEIIHVETPSNSTHG
FIHPGFGVRPMHACSCSKAIAAFAKQSFQENILSGMLNPYTPHTKTTRAALEAEFAAIVQ
QGYAECHEEIDIGVSSVAAPVFVGATGTTFSVGAVGPVRRFTKQYRKRLGEDLIAISAKL
GAAIQLCAVSQDRIADMPRPTEPQQKAKQLPNHH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgcatctggaccgcctgatcacaattctggaactcatcgccatggcaggccgtggcctc
tcggcggtggaggtgcagaaagcgaccgggctgccgaggcccacatgttaccgcctgttg
cagaccctcgctgaaaacaggttgatcgacgatcccggcgggtcatcgcgctatgtgatc
ggtgagcgtttgatcgggatcgcgctgctggggcaatccgacatcgacgtccggcgcgtc
tgcgcaccggtgctgcgcgaagccgcgttgaacctcgaagacagcgtgtttcttgcccgg
ttgcgcagcacggatgttgaaatcatccacgtcgaaaccccgagcaattccacacacggt
ttcatccatcccgggttcggcgtccgcccgatgcacgcctgctcctgctccaaggcgatt
gcggcctttgccaagcagagttttcaggaaaacatactctcgggtatgctcaacccctac
acgccgcacacaaaaaccacccgcgcagcccttgaagcagagttcgccgcgatcgtgcag
caaggctatgcggagtgtcacgaggaaatcgacatcggtgtttccagcgtcgcggccccc
gtttttgtgggcgcgaccggcacgacattcagcgtgggcgcggtcggccctgtgcgccgc
ttcacaaagcaataccgcaagaggttgggcgaagaccttatcgccatttctgcaaaactc
ggtgccgcaatccagctttgcgctgtgtctcaggaccggattgcagacatgccaagacca
acagaaccacaacagaaggcaaaacaactgccaaaccaccactaa
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