Roseobacter denitrificans: RD1_2395
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Entry
RD1_2395 CDS
T00376
Symbol
phnF
Name
(GenBank) phosphonates metabolism transcriptional regulator PhnF, putative
KO
K02043
GntR family transcriptional regulator, phosphonate transport system regulatory protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_2395 (phnF)
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RD1_2395 (phnF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
Rrf2
HTH_Crp_2
MarR_2
HTH_11
HTH_20
PaaX
HTH_DeoR
HTH_41
HTH_IclR
HTH_23
TrmB
Sca2
Motif
Other DBs
NCBI-ProteinID:
ABG31965
RoseoBase:
RD1_2395
UniProt:
Q166X8
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Position
2283558..2284226
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AA seq
222 aa
AA seq
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MRSDLAEGRYKTGDKLPTEAALAERFGVNRHTVRHGISALVAEGLVRTRRGAGAFVAATP
TDYPIGKRVRFHENLIAAGRRPEKRVLALDERAATVGEAQALQIEAGDPVCAYHGLSLAD
GQPIAVFESLFPLARLLGITAALKDTSSVTQALSVVGIDDYTRASTRLTAVRATPTLALL
LHVAEGDPLLKSSGVNNCAGGQPVEYGRTWFAGDRVTLTLET
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcagcgacttggccgaagggcgctataaaacgggtgacaaactgccgaccgaggct
gcgctggcggagcgctttggcgtgaaccgtcacacggtgcgccacgggatatccgcattg
gttgcggaagggctggtgcgcactcggcgcggtgcaggggcctttgtcgcggccacgcca
accgactatcccatcggcaagcgggtgcgtttccacgaaaacctgatcgcagcagggcgc
cggccagaaaagcgcgtgctcgcgttggacgagcgcgcagcgaccgttggcgaggcgcag
gcgttgcagattgaggcaggcgatccggtctgtgcctatcacgggctttcactggctgat
ggtcagccgattgcagtgtttgaaagcctgtttccgctggcgcgcctgttgggcatcacc
gctgctttgaaggacacaagcagcgtcacgcaggcattgagcgttgtgggcatcgacgac
tacacacgtgcctcaacccgcctgacggcggtgcgcgccacgccaaccttagcgctgctc
ttgcatgttgccgaaggcgatccgctgctgaaatcctccggtgtgaataactgcgcgggc
gggcaacccgtcgaatacggccggacctggtttgcgggggatagggtaacgctcacgctt
gaaacctga
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