Roseobacter denitrificans: RD1_2414
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Entry
RD1_2414 CDS
T00376
Name
(GenBank) spermidine/putrescine ABC transporter, ATP-binding protein, putative
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_2414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2414
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD1_2414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
NACHT
SMC_N
AAA_16
AAA_30
RsgA_GTPase
AAA_25
AAA_28
AAA
NB-ARC
nSTAND3
AAA_15
AAA_19
AAA_22
ORC-CDC6-like
TsaE
AAA_23
nSTAND_NTPase5
MobB
nSTAND1
AAA_29
AAA_14
Rad17
Motif
Other DBs
NCBI-ProteinID:
ABG31984
RoseoBase:
RD1_2414
UniProt:
Q166V9
LinkDB
All DBs
Position
complement(2303490..2304518)
Genome browser
AA seq
342 aa
AA seq
DB search
MLRIGAVSKRFGTVTVLKDCSLNIAEGEIVTLLGASGCGKTTLLRCIAGFWDAEEGKIEI
DGHDVGDLPVNRRPVGVVFQSYALFPHLTVARNVGYGLRMRGVPQSEIDARVREALETVS
LADFADRYPAQLSGGQQQRVAVARVLILQPRVLLLDEPFSALDAKLRGAMQVELRQLIKR
LGLTAIFVTHDQEEALTMSDRIAVMRAGRIEQVAAPDTVFDHPATAYVADFIGTSNFWQA
QASGGQVALPDGQITDTDISGPVQVMTRPHNLRLAAGDKGPWRGQVSFHRTVGALVEYHV
EIPDGTTIQVAAMRQERTRPWQAGEVVSLSVIDPSYCAVYPV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgcatcggggcggtttccaaacgttttggaacggtcactgtcctgaaagactgt
tccttgaatattgccgaaggcgagatcgtcacgctgcttggtgcgtcgggctgtggcaag
accacgctgctgcggtgcatcgccgggttctgggacgccgaggagggcaagatcgagatc
gacggccacgacgtcggtgacctgcccgtcaatcgccgccctgtcggcgtggtcttccaa
agctacgcgcttttcccgcatctgaccgtagcgcgcaacgtggggtacggtctgcgcatg
cgaggtgtgccccaaagcgagatcgacgcacgcgtgcgcgaggcgctggaaaccgtgtcg
ctggcggattttgccgatcgctaccccgcacagctttctggcggccaacagcagcgtgtg
gccgttgcgcgggtcctgatcctgcagccgcgtgtcctgctgcttgatgaacccttcagc
gcgcttgacgcgaaattgcgcggcgccatgcaagtggaactgcgccagttgatcaaacgg
ctggggctcacggcaatcttcgtgacccacgatcaggaagaagcgctgaccatgtccgac
cgtatcgccgtcatgcgtgcgggccggattgaacaggtcgccgcgcccgatacggtgttt
gatcacccggcaaccgcctatgtcgcggactttatcggcacatcgaatttctggcaggcg
caggcctcgggcggtcaggtggctttgccggacgggcagatcacggacacagatatttcc
gggccggtgcaagtcatgacgcggccgcacaacctgcgactggccgccggggacaaaggc
ccgtggcgcggacaggtttcctttcacaggaccgtcggtgccttggttgaatatcacgtc
gaaataccggatgggaccacgatacaggtcgctgccatgcgccaggaacgcacgcgcccg
tggcaagccggagaggtcgtaagcctatcggtgatcgatccgtcctattgcgcggtgtat
ccggtctga
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