Roseobacter denitrificans: RD1_2427
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Entry
RD1_2427 CDS
T00376
Name
(GenBank) ABC transporter, ATP-binding protein, putative
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_2427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2427
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD1_2427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
nSTAND1
RsgA_GTPase
AAA
AAA_16
Mg_chelatase
Rad17
AAA_5
AAA_29
SbcC_Walker_B
TOBE_2
NACHT
AAA_28
AAA_33
AAA_18
AAA_25
AAA_23
NPHP3_N
ORC-CDC6-like
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABG31994
RoseoBase:
RD1_2427
UniProt:
Q166U9
LinkDB
All DBs
Position
2313757..2314893
Genome browser
AA seq
378 aa
AA seq
DB search
MERAISIDDGAITPNAQKQSVGEPLTLGGISHSYGDGLAVDDVTLEVAGGELIALLGPSG
CGKSTLLRIVAGFLEQTRGEVKIGDRFVDSLPPNRREVGIVFQNYALFPHMTVADNIAYG
LDARGDAKSDQRQRVSEMLKTVRMEAFGNRKPGQLSGGQQQRVALARALAVRPRILLLDE
PFAALDKNLRLDMQIEIKRLQRQFALTAILVTHDQEEAMGIADRIAVMNKGRIEQLGSPV
EIYDQPATLFVNDFIGSSNRFAGEVLGREADRYVIRLDNGAIWHVASSKTFNTADGVLLT
VRPEQLMLVDQPAPGAFAVEHTLSMPLGGTLIHDVQTPDGATIKVAAPRRVGEVATPLGP
SHCALAETAAPILFPKPK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcgccatttccatcgacgacggggcgatcacgccaaacgctcaaaagcaatcg
gttggcgagccgctgacccttggtggcatatcgcacagctatggggacgggctggccgtc
gatgacgtcacactggaagttgccggtggggaactgattgcgcttctgggtccgtccggg
tgtgggaaatccaccctgcttcgcatcgtggcggggttcctcgaacaaaccagaggtgag
gtaaagatcggggatcgctttgtcgattccttgcccccgaaccgtcgcgaggtggggatc
gttttccagaattacgcgctctttccacatatgaccgtggccgacaatatcgcctacggt
cttgatgcgcgcggcgacgccaaatccgatcagcgacagcgtgtgtcggaaatgctcaag
accgtgcggatggaagcctttggcaatcgcaagccggggcaactgtcgggcggacaacag
cagcgcgttgcccttgcgcgtgcgcttgctgtacggccccgtatcctgctgcttgatgaa
ccctttgccgcgctggacaagaatctgcgccttgatatgcagatcgaaatcaagcgactg
caacgccagttcgcgctgaccgcgatcctcgtgacccacgatcaggaagaggccatgggc
atcgctgaccgcattgcggtgatgaacaagggccgcattgagcaattgggcagtccggtg
gaaatctacgaccagcccgcgacgctgttcgtcaatgatttcatcggatcttcgaaccgg
ttcgcgggggaggtgttgggtcgcgaagcggaccgctatgtcattcgtctcgacaatggc
gcgatctggcacgtggcatcgtccaagactttcaatactgcagacggggtcctgctgact
gtgcggccggaacagctgatgctggtggaccagcccgcgccgggcgcgtttgcggtcgag
cacacgctgagtatgcccctcggcgggacgctcattcacgatgttcagacgccagatggt
gccaccatcaaggtggcagcgccgcgccgtgtgggcgaggtggcaacgccccttggcccg
agccactgcgcgctggctgagacggccgccccgatcctctttcccaagcccaaatga
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