Roseobacter denitrificans: RD1_2510
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Entry
RD1_2510 CDS
T00376
Symbol
putR
Name
(GenBank) proline dehydrogenase transcriptional activator, putative
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_2510 (putR)
03036 Chromosome and associated proteins [BR:
rde03036
]
RD1_2510 (putR)
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RD1_2510 (putR)
Chromosome and associated proteins [BR:
rde03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RD1_2510 (putR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
MarR_2
HTH_5
HTH_10
AsnC_trans_reg_3
Fe_dep_repress
HTH_20
TrmB
DUF6262
HTH_26
HTH_11
DUF7343
HTH_CodY
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABG32069
RoseoBase:
RD1_2510
UniProt:
Q166M4
LinkDB
All DBs
Position
2396453..2396914
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AA seq
153 aa
AA seq
DB search
MDIDRFDRAILSVLAEDGRISITDLSKRIGLSKSPTQARLRRLEQSGVVIGYRALLDPIR
LGLDHVAFVEVRLSDTREAALNAFNLAIARVPQIEQAHMIAGNFDYLLKVRTRDMSDYRR
FLGETISELPHVENTSTYVAMQAVKETMLAEKG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaccggtttgatcgtgcgatcctgtccgtactggccgaagatggccggatc
agcatcaccgatctgtccaagcggatcggcttgtccaaatcgcccacgcaagcgcgtctg
cggcggctcgaacaaagtggtgtcgtgatcggatatcgggccttgctggacccgatccga
ttgggcttggatcacgtggctttcgtcgaagtgcgcctgagtgataccagagaggcggcg
ttgaatgcgttcaacctcgcgattgcgcgggtgccgcagatcgagcaagcccatatgatt
gctgggaattttgactatcttctgaaggtgcgcacgcgcgacatgtctgattaccgccgc
tttctgggcgagacgatctcggagctgccccatgtcgaaaacacctccacctatgtggcg
atgcaggcggtgaaggaaacaatgctggcggaaaagggttga
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integrated database retrieval system
