Roseobacter denitrificans: RD1_2566
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Entry
RD1_2566 CDS
T00376
Name
(GenBank) metallopeptidase, family M24, putative
KO
K28067
dimethylpropiothetin dethiomethylase [EC:
4.4.1.3
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00920
Sulfur metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01320
Sulfur cycle
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
RD1_2566
Enzymes [BR:
rde01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.3 dimethylpropiothetin dethiomethylase
RD1_2566
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M24
Creatinase_N
Motif
Other DBs
NCBI-ProteinID:
ABG32123
RoseoBase:
RD1_2566
UniProt:
Q166H0
Structure
PDB
PDBj
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All DBs
Position
complement(2454926..2456269)
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AA seq
447 aa
AA seq
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MNRHFNATRKIDPSRGATLGDGSPNDMNRVEIGPTQLAFAEWHTARLDLPDLAAMRRFRH
RRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNS
PFLSEFNPLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKVML
HGLRALQAQGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDG
VTCENDIWAILHSENVRRGGEWIETRLLASGPRSNPWFQECGPRVCQRNEIISFDTDLVG
AYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAK
FQKQKYGCLMHGVGLCDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISEEGGDFSIKL
EDQVLITEDGYENLTKYPFDPALMGVE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcatttcaacgcaacacgcaagattgatcccagccgcggcgcaacccttggc
gatggctcgccaaatgacatgaacagggtcgaaatcggcccgacgcagttggcctttgca
gagtggcacaccgcaagattggacctgcccgatctggctgcgatgcgccgatttcgtcac
cgtcgcctcacggatcatgtcgtggcacgcggctatgccggcttgctgatgtttgacccg
ctcaacatccgctatgccaccgacagcaccaatatgcagctttggaacacgcataatccg
tttcgcgcgacgctgctctgtgcggatggctatatggtcatgtgggattacaagaactcc
ccttttctgagtgaattcaacccgctggtacgagaacaacgcgccggggccgatctgttc
tatttcgaccggggcgacaaggtggatgtggcggcggatgtttttgcaaacgaggtgcgc
attctcttgcgcgaccatgccccgggattgcgacggctggcggtcgataaggtcatgctg
cacggtttacgcgcgctgcaggcgcagggtttcgagatcatggacggggaagaggtcact
gaaaaagcccgttctgtcaaaggtccggatgagatccgcgcgatgcgctgcgcctcacat
gcctgcgaggtggctgtgcgcaagatggaggatttcgcccgcagcaaggtcggcgatggc
gtcacctgtgagaatgacatctgggccatcctgcacagcgaaaacgtgcgccggggcggc
gagtggatcgaaacccgcctgctggcttccgggccgcgttcaaacccgtggtttcaggaa
tgtggcccgcgcgtgtgccaacgcaacgagatcatctccttcgacactgatctggtgggt
gcctatggcatctgcacggatatttcgcgcagctggtggatcggggatcaaaaaccacgc
gctgacatgatctacgcgatgcagcatggggtcgagcacatccgaacaaatatggagatg
ctcaaacccggcgtgatgatcccggaactgtctgcgaatactcatgtgctggacgcgaag
tttcagaaacagaaatacggctgtctgatgcacggcgttggcctgtgtgatgaatggccg
ctggtggcctatccggatcatgcggtcgcgggcgcctatgattacccgctggagccgggc
atgacactctgtgttgaggccttgatcagcgaggaaggcggtgatttctcgatcaaactg
gaggatcaggtcctgatcactgaggacggctatgaaaacctcacaaagtatccgttcgat
ccggccttgatgggcgttgagtag
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