Roseobacter denitrificans: RD1_2704
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Entry
RD1_2704 CDS
T00376
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00480
Glutathione metabolism
rde00720
Other carbon fixation pathways
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01210
2-Oxocarboxylic acid metabolism
rde01230
Biosynthesis of amino acids
rde04146
Peroxisome
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_2704 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
RD1_2704 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RD1_2704 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD1_2704 (icd)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RD1_2704 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ABG32243
RoseoBase:
RD1_2704
UniProt:
Q165V0
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All DBs
Position
2573354..2574568
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AA seq
404 aa
AA seq
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MTKIKVQNPVVELDGDEMTRIIWDFIKQKLILPYLDIDLKYYDLGMESRDATDDQITVDA
AHAIKEHGVGVKCATITPDEARVEEFGLKQMWRSPNGTIRNILGGVIFRQPIICRNVPRL
VPGWTKPIVVGRHAYGDQYRATDFKFPGKGKLTLKFVGEDGTEIEREVFDAPDSGVVMAM
YNLDKSIIDFARASFNYGLTLGWPVYLSTKNTILKQYDGRFLELFAQVFEAEFKEKFDAA
GIWYEHRLIDDMVASAMKWSGGYVWACKNYDGDVQSDTVAQGFGSLGLMASVLMTPDGQV
VESEAAHGTVTRHYRQHQKGEATSTNSIASIYAWTGGLKHRAKLDDNDALLNFAETLEKV
VVDTVESGFMTKDLALLVGPDQGWLTTQGFLEKISENLNTALAG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagatcaaagtgcaaaaccccgttgtggaactcgatggggatgaaatgacccgc
attatctgggatttcatcaagcagaaattgatcctgccctatctggatattgatctgaaa
tactatgatctgggtatggaatcccgcgatgccacggacgatcagatcaccgtggatgca
gcccatgcgatcaaggaacacggtgtcggtgtcaaatgcgcgacgatcacgccggatgaa
gcccgcgtcgaagagttcggcctgaaacagatgtggcgctcgcccaatggcacgatccgc
aacattctgggcggggtgatctttcgccagccgatcatttgccggaacgtgccgcgcctc
gtgcccgggtggacaaaacccatcgttgtggggcgtcacgcctatggcgatcaataccgc
gcgacagatttcaaatttcccggcaagggcaagctgaccctcaaatttgtcggtgaagac
ggcacggagattgagcgcgaggtctttgacgcgcccgacagcggtgttgtgatggcgatg
tacaacctcgacaaatccatcatcgattttgcgcgcgcatccttcaattatggcctcact
ctgggctggcccgtctatctgtccacgaaaaacaccattctgaaacaatatgacgggcgg
ttcctcgaactcttcgcgcaggttttcgaggcggaattcaaggagaaattcgacgccgcc
ggtatctggtacgaacaccgcctgattgatgacatggtcgcctctgccatgaagtggtcg
ggtggatatgtctgggcctgcaagaattatgatggcgatgtgcagtcggacacggttgcg
cagggctttggatcactggggctgatggcatcggtgttgatgacaccggacggacaggtc
gtcgaatccgaagccgcgcatggcaccgtcacccgccattatcgccagcaccagaaaggc
gaagcgacctcgaccaattccattgcctcgatctatgcctggacaggcgggctgaagcac
cgtgccaagcttgacgacaatgacgccttgctcaattttgccgaaacgctggaaaaagtg
gtcgtggatacggtggaaagcgggtttatgaccaaagaccttgcgctgctcgtggggccg
gatcagggctggctgacaacgcaggggttcctggaaaagatcagcgagaacctcaacacg
gcgcttgcaggctga
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