Roseobacter denitrificans: RD1_2726
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Entry
RD1_2726 CDS
T00376
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rde03032
]
RD1_2726 (gyrA)
03400 DNA repair and recombination proteins [BR:
rde03400
]
RD1_2726 (gyrA)
Enzymes [BR:
rde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RD1_2726 (gyrA)
DNA replication proteins [BR:
rde03032
]
Prokaryotic type
DNA Topoisomerases
RD1_2726 (gyrA)
DNA repair and recombination proteins [BR:
rde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RD1_2726 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIN
Motif
Other DBs
NCBI-ProteinID:
ABG32261
RoseoBase:
RD1_2726
UniProt:
Q165T2
LinkDB
All DBs
Position
2596178..2598895
Genome browser
AA seq
905 aa
AA seq
DB search
MRPERPVYDGPSVSIEQEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILFAMHETGNT
HDKPYRKSARPVGDVMGQYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPA
AMRYTEVRMDKPAAYLLADIDKDTVDFQDNYDGKQKEPTVLPARFPNMLVNGAGGIAVGM
ATNIPPHNLGEVIDATLALIEEPDLTSEQLIDYVPGPDFPTGGIMLGRGGARKAYLEGRG
SVIIRAKTRVEEIRKDRWAIIVDEIPYQVNKATMIEKIAEQVREKKIDGIAHVQDESDRN
GVRVVIELKRDATAEVVMNQLYRFTPLQTYFGCNMLALNGGRPEQLTLRKFLTYFIDFRE
DVVARRTAYLLRKARERSHVLCGLAVAVTNIDEVVATIRASADAAEAREKLMTRRWPAQD
ILPYIALIDDPTHTANDDGTYNLSETQARAILDLRLQRLTQIGVKEVTDELEELAGKIKE
YLEILGSRDRIMGIIADELREVRELFAVPRRTEIVDWSGDMEDEDLIAREDMVVTVTQGG
YIKRTPLADFRSQRRGGKGLSGGSLKEDDVVTTLFVANTHTQLLFFTTDGMAYKLKTWRL
PQGARTSKGKAIVNILPIPQGVSIAAILPIDRDEKDWSQLQIVFATSAGTVRRNALSDFT
NVKSNGKIAMKFEDEHAETTLINARIASPDDDVMLVTASGRAIRFPSEDVRVFNSRSSVG
VRGVKLSGHDKVVSMSVIRHFDATADERAAYLKMRRAMVGLTDDSETSDEDETSANATIS
PDRYAEMSAAENLILTLTAGGAGKLSSSHDYPVRGRGGMGVTAWDKRMQTGQIVASFPVE
MDDQIMLATSKGQSIRVPVEGISFRSRSAGGVKVFNTGKGEEVVSVAWIADQGEDDTDGE
DAQNA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgagcgccctgtttacgacgggccttcggtcagcatcgaacaagaaatgcgc
acatcctatctggattatgcgatgtcggtcattgtcagccgcgcgatcccggacctgcgg
gatggattgaaaccggtgcaccgccgcatcctgttcgcgatgcatgaaacgggcaatacc
cacgataaaccttatcgcaaatccgcgcgtcccgtgggcgatgtgatgggtcagtatcac
ccccatggggacagcgcgatttatgacgcactggtgcgcatggcacaggatttttccatg
tcactgccgctgctggatggtcaggggaattttggctcgatggacggggataaccctgcg
gccatgcgctataccgaggtgcgcatggacaagcctgccgcctatctgctggcggatatc
gacaaggacacggttgattttcaggacaattacgacggcaaacagaaagagccgaccgtg
ctgcccgcgcgctttcccaacatgctggtcaacggtgcggggggcattgctgtcggcatg
gccaccaatattccgccgcacaatctgggcgaggtgatcgacgccacgctggcgctgatc
gaggagccggatctgacgtccgagcagctgatcgactatgtgcccggccccgatttcccg
acgggtggcatcatgctggggcgcggcggggcccgcaaagcctatctcgaagggcgcggc
tcggtcatcatccgcgccaagacacgggtggaggaaatccgcaaggatcgctgggccatc
atcgtcgatgagatcccctatcaggtcaataaggccacgatgatcgaaaagatcgccgaa
caggtgcgcgagaaaaagatcgacggcatcgcccatgtgcaggacgaaagcgaccgcaat
ggcgtgcgggtcgtgatcgaattgaaacgggatgcgaccgccgaagtggtgatgaaccag
ctttatcgctttacgccgctgcaaacctatttcgggtgcaacatgctggcgctgaacggt
gggcgccccgaacagctgaccctgcgcaagttcctgacctatttcatcgacttccgcgag
gacgttgtggcgcgccgcactgcgtatctgttgcgcaaggcgcgcgaacgcagccatgtg
ctctgtggtctggctgtggccgtgacgaatatcgacgaggtcgtggcgaccatccgggcc
tccgccgatgccgccgaggcgcgcgaaaagctgatgacccggcgctggcccgcgcaggac
atcctgccctatatcgcgctgattgatgatccgacccatacggccaatgacgacggcacc
tataacctgtcggaaacacaggcccgcgccattctcgatctgcgcttgcagcgcctgacc
cagatcggtgtcaaggaagtcaccgacgagcttgaagaactggcaggcaagatcaaggaa
tacctcgaaattctggggtcacgcgaccggatcatgggcatcatcgcggatgagctgcgc
gaggtacgcgagttgttcgccgtaccacgccgcacagagatcgtcgattggtccggtgac
atggaagacgaagacctgatcgcgcgcgaggatatggtcgtgaccgtcacccaaggtggc
tacatcaaacgcacgccgctcgccgatttccgcagccagcggcgcggcggcaagggtctg
tcaggtggcagcctcaaggaagatgatgtggtcaccacgctgttcgtggcaaatacccac
acgcaactgctgttctttaccaccgacggcatggcctacaagctcaagacatggcgcttg
ccgcagggcgcacgcacctcgaagggcaaggcgattgtcaatattctgccgatcccgcag
ggggtctccatcgcggcgatcctgcccattgaccgcgacgaaaaggactggtcgcaattg
cagatcgtctttgccacctcggcgggcacagtgcggcgcaacgcgctatccgatttcaca
aacgtgaaatccaacggcaagatcgcgatgaagtttgaggatgaacatgccgaaaccacg
ctgatcaacgcgcgcatcgcctctccggatgatgatgtgatgcttgtcaccgcgtcgggg
cgcgcgatccggttcccaagcgaagacgtgcgcgtgttcaattcccgtagctctgtgggc
gtgcgcggtgtaaaactctctgggcatgacaaagttgtatcgatgtccgtaatccgccat
tttgacgcgactgcggacgaaagagcggcctatctgaaaatgcgacgcgcgatggtgggc
ctgacagatgatagtgagacctctgatgaggacgaaaccagtgccaacgccacgatcagc
ccggatcgctatgcggaaatgtctgcggcggaaaacctgatcctgacacttacggcggga
ggcgcgggaaagctgagttccagccatgattatccggtgcgcggacgtgggggcatgggt
gtgaccgcttgggacaaacgcatgcagacgggtcaaatcgtggcctccttcccagttgag
atggacgaccagatcatgcttgccacctccaagggccagtcgatccgggttcccgtggaa
ggcatctctttccgctcccgctcggccgggggtgtcaaggtcttcaacaccggcaagggc
gaagaggtcgtgagcgtcgcgtggatcgcagatcaaggcgaggatgacaccgacggtgag
gacgcccagaacgcctga
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