Roseobacter denitrificans: RD1_2734
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Entry
RD1_2734 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00240
Pyrimidine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RD1_2734
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
RD1_2734
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
ABG32269
RoseoBase:
RD1_2734
UniProt:
Q165S4
LinkDB
All DBs
Position
2606286..2607218
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AA seq
310 aa
AA seq
DB search
MTNLPLRHSAEVAAAKAAGRPIVALESTIITHGMPYPQNLEVARQVEDDLRAAGVTPATI
AVMDGTLHIGLEAHQLEALAQAKGVAKLSRADIAACMATGGTGATTVSATMIAAHLAGIS
VFATGGIGGVHRGAESSFDVSADLLELAQTPVTVVAAGAKAILDVAKTLEVLETQGVPVI
TVGQDSFPAFWSAESVFKSPLRMDDPVGIAAAHQMRVDLGLPGGQLVANPIPHTDEIPAT
ELAPIIATAQADAEKHGIKGKAVTPYLLQRIYELTQGRSLTANIALVRNNARLAGAIAQA
LIANARIAGK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctacccttgcgccatagtgccgaagtggccgccgccaaagccgccggacgc
ccgatcgtggcgctggaaagcaccatcatcacccacggcatgccctatccccaaaacctt
gaggtggcccgtcaggtcgaggatgatttgcgcgccgcaggggtaacacccgccaccatc
gccgtgatggacggtacgctgcacatcgggcttgaggcgcatcaactcgaggcgcttgcg
caggccaagggggtcgccaaactctcgcgcgccgacatcgccgcctgcatggccacgggc
ggcaccggggcgacgaccgtttcagcgacgatgatcgcggcccatcttgcgggcatatcg
gtttttgcaacgggcggtatcggcggggtccatcgcggcgcggagtccagttttgacgtt
tctgccgacctgctggagcttgcacaaacccccgtgaccgtcgtggccgccggggccaag
gccattctggatgtggccaaaacactggaagtgctggaaacacagggcgtgccagtcatc
accgtgggtcaggacagtttccccgccttctggagcgcggaatccgttttcaaatcgccc
ctgcgcatggatgatcccgtcgggatcgcagcggcccatcagatgcgcgtcgatctcggc
ctgcccggcggtcaactggtggccaatcccattccgcacacggatgaaatcccggcaacc
gaactcgcgccgatcatcgccacagcgcaggcggatgccgagaagcacggcatcaagggc
aaggccgtgaccccgtatctgctgcagcgcatctatgagttgacgcaaggacggtccctg
acggcaaacatcgcgctggtgcgcaataacgcgcggctggccggggcgatcgcccaagcc
ttgatcgccaatgcccgcattgcgggaaagtga
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integrated database retrieval system
