Roseobacter denitrificans: RD1_2749
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Entry
RD1_2749 CDS
T00376
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_2749 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rde04147
]
RD1_2749 (hemB)
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RD1_2749 (hemB)
Exosome [BR:
rde04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RD1_2749 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Pterin_bind
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABG32281
RoseoBase:
RD1_2749
UniProt:
Q165R2
LinkDB
All DBs
Position
2620395..2621393
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AA seq
332 aa
AA seq
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MRPTQAPFPATRLRRLRQSPAIRALTRQNTLTVDDFIWPVFVRAGEGIKEEIPSMPGVFR
RSVDQLVEAAREAADLGIPAICIFPYTGIEERTEDCAGAWDPENHVNRAIRAIKQAVPDI
AVMTDVALDTYNINGHDGFVENGEIVNDRTVEALVKMTLAQAEAGADIIGPSDMMDGRIG
AMREGLEAAGHQRVMILSYSAKYASAFYGPFRDAVGASGALSGDKKTYQMDPGNSDEALR
LIERDLREGADMVMVKPGMPYLDICRRVKDAFGAPTYAYQVSGEYAMIQSAAANGWIDGD
KVMMESLMAFKRAGCDGILTYFAPAAARILNP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgacacaagccccctttcccgccacccgtctgcgccgcctgcgccaaagcccg
gccatccgtgctttgacgcggcagaacacgcttacggtggatgattttatctggccggtt
ttcgtgcgcgccggtgaggggatcaaggaggagatcccctcgatgccgggtgtctttcgc
cggtcggtcgatcaactggtggaggctgcgcgcgaggcggcagatctgggcatccccgcg
atctgcatctttccctataccggcatagaagagcgtacagaggattgcgcgggcgcgtgg
gatccggaaaaccacgtcaatcgggccatccgcgccatcaaacaggcggtgccggatatt
gcggtgatgaccgatgtggcgctggatacctataacatcaacgggcatgacggctttgtc
gaaaacggagagatcgtcaacgaccgcacggtcgaggcgctggtcaagatgacgctggcg
caggctgaggcgggcgcggatatcatcggcccgtcggatatgatggatgggcggatcggt
gcgatgcgcgaaggacttgaagcggcggggcatcagcgggtcatgatcctgagctattcg
gcgaaatatgcctccgccttttacggacccttccgcgatgcggtgggggcatccggtgcc
ttgagcggtgacaagaagacctaccagatggaccccggcaattccgatgaagccctgcgt
ctgatcgaacgcgatctgcgcgaaggggcggatatggtcatggtcaaacccggcatgccc
tatctcgacatctgccgccgggtcaaagatgcctttggggcgccgacctatgcctatcag
gtgtcgggcgaatacgcgatgatccagagtgcggcggccaatggctggatcgacggggac
aaggtcatgatggaaagcctgatggcgttcaaacgcgcgggctgtgatggcattctgacc
tattttgccccggcagcggcacgtatcctcaacccgtag
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