Roseobacter denitrificans: RD1_2753
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Entry
RD1_2753 CDS
T00376
Name
(GenBank) RNA pseudouridylate synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_2753
Enzymes [BR:
rde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
RD1_2753
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RD1_2753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
FixG_C
Motif
Other DBs
NCBI-ProteinID:
ABG32285
RoseoBase:
RD1_2753
UniProt:
Q165Q8
LinkDB
All DBs
Position
2625558..2626121
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AA seq
187 aa
AA seq
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MARVILFNKPFGVLSQFTDKGSEGSPRPTLSAFIDAPGFYPAGRLDRDSEGLMVLTDDGK
LQARISNPKHKMTKTYLAQIEGTPEPQHIEALRAGVRLKDGMTRPAQVSVATPPDTLWER
SPPVRFRKTVPDAWLQISISEGRNRQVRRMCAHVGLPCLRLIRMRIGDWALNDLVPGAWR
FAAHSGR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcatcctgttcaacaaacccttcggggtgctgtcgcaattcaccgacaag
ggcagcgaaggatcaccgcgcccgacgctttcggccttcatcgacgcgccagggttttac
cccgccggacggcttgacagggacagcgaggggctgatggtgctgaccgatgacggcaag
ttgcaggcgcgcatcagcaatcccaaacacaagatgaccaagacctacctggcacagatc
gaaggcacaccggagccacagcacatcgaggcgctgcgcgcgggcgttcgtctgaaagac
ggcatgacccgtcccgcgcaagttagtgtcgcaacgccgcccgataccctgtgggagcgc
agcccgcccgtgcggtttcgcaagacagtgccggatgcgtggctgcagatatccatatcg
gaagggcgcaatcggcaggtccggcggatgtgcgcgcatgtgggcttgccctgtctgcgc
ctgatccggatgcgtatcggggattgggcgctgaatgatctggtgccgggggcctggcgg
tttgcagcccacagcgggcggtga
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