Roseobacter denitrificans: RD1_2811
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Entry
RD1_2811 CDS
T00376
Symbol
degU
Name
(GenBank) transcription regulatory protein degU, putative
KO
K07684
two-component system, NarL family, nitrate/nitrite response regulator NarL
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_2811 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rde02022
]
RD1_2811 (degU)
Two-component system [BR:
rde02022
]
NarL family
NarX-NarL (nitrate respiration)
RD1_2811 (degU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_28
HTH_38
HTH_29
HTH_Tnp_ISL3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ABG32339
RoseoBase:
RD1_2811
UniProt:
Q165K4
LinkDB
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Position
2679865..2680515
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AA seq
216 aa
AA seq
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MTQTSPDPIKVLIIDDHPMVAEGIQSILESYEDLSVVGSCNSARDAIARLDHFDPDVILM
DLNMPDMGGLTATEIVLERRPGTRILILSMHDSAEYISSALSHGAMGYILKDVPTDEIKQ
AIDAVMAGDQYLCTGARGSLQPKEGEAREALTGREQTILLQLAQGKSNKDVATALDISVR
TVETHRKNIKRKLGISSTAGLTRYAMEHGVLQGTGI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacatccccggacccgatcaaggtattgatcattgatgaccatccgatggtc
gccgaaggaatccagtcgattctggaaagctacgaggatctgagcgtcgtgggcagttgc
aattccgcgcgtgacgcgatcgcgcggctcgaccattttgatccggatgtgatcctgatg
gatctgaacatgccggatatgggtgggctgaccgcgaccgagatcgtgctggaacgccgc
cccggcacgcgcatcctgatcctgtcgatgcatgacagcgccgaatatatatcatccgcg
ctgagccatggggccatgggctatatcctcaaggatgtaccgaccgacgaaatcaaacag
gccatagacgccgtcatggcaggtgatcaatacctctgcaccggcgcgcgcgggtcgctg
caacccaaggaaggcgaggcgcgcgaagcgttgaccgggcgcgagcagacgatcctgctg
caacttgcacagggtaaatccaacaaggatgtcgccacagcgctggatatttccgtccgc
acggtcgagacacaccgcaagaacatcaaacgcaaactgggcatttccagcaccgccggt
ctgacccgatatgcgatggagcatggcgtgctgcagggcaccggcatctga
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