Roseobacter denitrificans: RD1_2821
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Entry
RD1_2821 CDS
T00376
Symbol
amiC
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase, putative
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
rde
Roseobacter denitrificans
Pathway
rde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RD1_2821 (amiC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
RD1_2821 (amiC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rde03036
]
RD1_2821 (amiC)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
RD1_2821 (amiC)
Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
Peptidoglycan biosynthesis and degradation
Amidase
RD1_2821 (amiC)
Chromosome and associated proteins [BR:
rde03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RD1_2821 (amiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ABG32349
RoseoBase:
RD1_2821
UniProt:
Q165J4
LinkDB
All DBs
Position
complement(2691254..2692471)
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AA seq
405 aa
AA seq
DB search
MIRYVRLCALVLGVLAAPLTAQDLSGVARVDVANSHIKQNWFGRLEMHLALSQGVPYRVF
TLDQPPRLVVDFREVDWSGVSAQALLDTKTSINALRFGVFQPGWSRLVADLAQPMLPEEV
AMTVKEGTGAANLTLVMQPADPDTFASTSGVPQNSVWPVEQPNEAQATGSDDRFVVVIDP
GHGGIDPGAEREGLSEKTLMLDVAFELRAALMRAGDVDVVLTRDRDVFVSLQNRVAQAHR
AGADVFLSLHADALSEGGAQGATVYTLSEEASDTATAHLAVRHNRADIIAGADLTGSDNA
VTTVLLDLARVETEPRSKALAHVLVDTMGAAGGPMNTRPLRQAGFSVLKSADIPSVLVEV
GFLSSARDLENLRNPEWRSKMVEAMARAILQWRVEDAEMRALIRQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatacgtgagactttgcgcccttgtcctgggcgtattggcagcaccgcttact
gcgcaggacctgtccggcgttgcgcgggtggatgtggccaacagccacatcaaacagaac
tggttcggccggttggaaatgcatctggccctgtcgcagggcgtgccatatcgcgttttt
acccttgatcaacccccgcgtctggtcgtggacttccgggaagtggattggtccggcgtg
tcggcgcaggcgctgctggacacaaagaccagcatcaacgcgctgcgtttcggcgttttt
cagcccggctggtcgcggctggtggcggatctggcgcagccgatgctgcccgaagaggtc
gcgatgactgtaaaggagggcaccggtgcggcaaacctgacactggtgatgcagcctgcc
gatcccgatacctttgccagcacatcaggtgtgccgcaaaattccgtctggccggtggag
cagcccaatgaggcgcaagcaaccggctctgatgatcgctttgtcgttgtgattgatccg
ggtcacggcggtattgatcccggcgctgagcgcgaagggctgtcggaaaagacgctgatg
ctggatgtggcctttgaattgcgcgcggccctgatgcgcgcgggcgatgtggatgtggtg
ctgacccgtgaccgggatgttttcgtctcgctgcaaaaccgtgtggcgcaagcgcatcgc
gccggcgcggatgtcttcctgtcccttcatgcggatgcgctgagcgagggcggcgcgcag
ggtgccacggtctacaccctgtcggaggaggccagcgataccgcaaccgcccatctggcg
gtgcgccacaaccgcgcggacatcatcgccggtgccgatctgaccgggtcggataacgcc
gtgacgaccgttctgctggatctggcgcgcgtggaaacggaaccgcgatcaaaagcgctg
gcgcatgtgctggtcgataccatgggggcagcgggtggtccgatgaacaccagacccctc
cggcaggcaggtttttcggtgctgaaatccgccgatatcccgtcggttctggtcgaggtc
ggatttctttccagcgcgcgcgatcttgaaaacctgcgcaaccctgagtggcgcagcaag
atggtggaggccatggcgcgcgccattctgcagtggcgggtagaagacgcggagatgcgc
gcgctgataaggcagtag
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