KEGG   Roseobacter denitrificans: RD1_2849
Entry
RD1_2849          CDS       T00376                                 
Name
(GenBank) AMP-binding domain protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rde  Roseobacter denitrificans
Pathway
rde00061  Fatty acid biosynthesis
rde00071  Fatty acid degradation
rde01100  Metabolic pathways
rde01212  Fatty acid metabolism
rde02024  Quorum sensing
rde04146  Peroxisome
Module
rde_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RD1_2849
   00071 Fatty acid degradation
    RD1_2849
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RD1_2849
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD1_2849
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rde01004]
    RD1_2849
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rde04147]
    RD1_2849
Enzymes [BR:rde01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RD1_2849
Lipid biosynthesis proteins [BR:rde01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RD1_2849
Exosome [BR:rde04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RD1_2849
  Exosomal proteins of breast cancer cells
   RD1_2849
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ABG32375
RoseoBase: RD1_2849
UniProt: Q165G8
LinkDB
Position
complement(2719557..2721062)
AA seq 501 aa
MNLAHWLERQAQITPGRPALFLGTECVADYGQFWRDARAVAGWLLAQGVGSGDRVALFMT
NVPDYLTVFYGIWAVGAAAVPINAKLHGREAAFILENSGAKHVFTSPELSASLIEAGVST
TQTEVPGTAFEAIRAHEPIDVIVPRDPDDLAWLFYTSGTTGKPKGVMITHRMLSVMSLCY
VTDIDPVSPEDATIYAAPMSHGAGIYNMIHVRAGARHVCPPSGGFDPDEILTLAQHFGNA
HLFAAPTMVNRLTQYASGAGQRGEGLRTIIYAGGPMYNADIIAAVDHFGPVFIQIYGQGE
CPMGITALSRADVTDRTHADWARRLQSVGRAQSAVEVAIGDENGKPLTVGEHGEIMVRGD
TVMPGYWTNPEATAKTLLNGWLMTGDMGFMSADGYLTLQDRSKDMIITGGSNVYPREVEE
VLLRDSGVTEVSVVGRPHAEWGEEVVAFVVGDVDPARLDQLCLDHMARFKRPKEYVKLEA
LPKNNYGKILKTELRALLTRS
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaacctcgcacattggcttgagcgacaggcgcagatcacgcccgggcgacccgcgctt
tttctcggtacagagtgtgtggcggactacggccagttctggcgcgatgcccgcgccgtg
gcgggctggcttttggcgcagggtgtggggtcgggtgaccgcgtggcgctgttcatgacg
aatgtaccggattatctgaccgtcttttacgggatctgggcggtcggggcggcggcggtg
ccgatcaatgccaagttacacggccgtgaagcggcgttcattcttgagaacagcggtgcc
aaacatgtgttcacctcgccggagttgagcgcatcgctcattgaggccggtgtcagcaca
actcagaccgaggtgcccggcaccgcgttcgaggccatccgggcgcacgagccgatagat
gtaattgtgccacgcgacccggatgatctggcctggctgttttatacgtccgggacaacg
ggcaagcccaaaggggtgatgatcacccatcgcatgctcagcgtgatgagcctgtgttac
gtcacggatatcgacccggtttccccggaggatgccacgatctacgctgcgccgatgagc
catggcgcaggtatctacaacatgatccacgtccgcgccggggcgcgccacgtttgcccg
ccctcggggggctttgatcccgatgaaatcctgacgctggcgcagcatttcgggaatgcg
catctttttgcggcccccacgatggtcaaccgcctgacccaatatgcctcaggcgcaggc
cagcggggcgaggggctgcgcacgatcatctacgcgggtgggccgatgtataacgcggat
atcatcgcggccgtggatcacttcgggcctgtcttcatacagatctatggtcagggcgaa
tgcccgatgggtatcaccgccctgtcccgcgcggatgtgacagacaggacgcatgccgat
tgggcgcgtcgcctgcaatcggtcgggcgtgcgcaatccgcggtcgaggtcgcgattggg
gacgaaaacggcaagccgctcaccgtcggagaacacggagaaatcatggtgcgcggcgac
acggtcatgcccggatattggaccaacccggaggcgacggccaagaccctgctgaacggc
tggctgatgacgggcgacatggggttcatgtcagcagatggatacctgaccctgcaggac
cggtccaaagacatgatcatcacggggggatcgaacgtctacccgcgcgaagtcgaagag
gttttgctgcgcgacagcggcgtcaccgaagtgtcggtcgtgggacgcccccatgcggag
tggggtgaggaggtcgtcgcattcgtcgttggcgacgtggaccctgcgcggctggatcag
ctgtgccttgatcatatggcgcgcttcaagcggccgaaggaatacgtcaagctagaggcc
ttgccgaaaaacaattacggtaaaatcctgaaaacggagttgcgcgcgcttttgacccgg
tcgtga

DBGET integrated database retrieval system