Roseobacter denitrificans: RD1_2873
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Entry
RD1_2873 CDS
T00376
Name
(GenBank) glycogen synthase
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00500
Starch and sucrose metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
Module
rde_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RD1_2873
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rde01003
]
RD1_2873
Enzymes [BR:
rde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
RD1_2873
Glycosyltransferases [BR:
rde01003
]
Polysaccharide
Storage polysaccharide
RD1_2873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
GT4-conflict
HCV_core
Motif
Other DBs
NCBI-ProteinID:
ABG32399
RoseoBase:
RD1_2873
UniProt:
Q165E4
LinkDB
All DBs
Position
complement(2746598..2748037)
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AA seq
479 aa
AA seq
DB search
MKVLFVASECAPFVKTGGLADVIGAVPKALAPLGVEARVMLPLYPALRVLSEGGKTVWSS
DNLHGGAARLLDVRAEGLDLLLLDAPHLFDRGGNIYLDADGTDWPDNPLRFGALSWVAAD
IAANGAAGWQPEIVHAHDWQAGLVPAYLHQMDAPKPPCVLTIHNIAFQGLFSPDLMAPLG
LDAALYTQDGMEFYGNLGFLKAGLAFADKITTVSPTYAREIMQPEFGMGLEGLLRARARD
VSGILNGIDTDVWNPETDPALPKSYSLKGLKAKQQSRQAVLERFGLTPPDNAPLFCVISR
LTTQKGVDVLLDVVPDLVARGAGLAVLGSGDRDLEAAFVAAAHRFPGAVGVIIGYDEDLS
HLMQGGSDAILIPSRFEPCGLTQLYGLRYGTIPVVARTGGLADTIIDANEAALAATCATG
VQFAPVTPDALSHAIDRCCDLFAERKTWSGMMRCAMRHPVGWETSSKAYLEVYDRLLGG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagttctttttgtggcatccgaatgcgcaccctttgtcaaaacgggtggtctggcg
gatgtgatcggcgcggtccccaaggcgcttgcgccgctgggggttgaggcgcgtgtcatg
ctgccgctttatccggcattgcgcgtgctctccgagggggggaagacggtctggtcgtcg
gataatctgcacgggggtgcggcgcgcctgctggacgtcagggcggaggggcttgatctg
ctgttgctggatgcgccgcatctctttgatcggggcggaaacatctatctggatgcggat
ggcaccgactggcctgacaatccgctgcgcttcggggcgctgtcatgggtcgctgctgac
atcgcggcaaacggtgccgccggttggcaacccgagatcgtgcatgcgcatgactggcag
gcggggttggtgccggcctatctgcatcagatggacgcgcccaaaccgccctgcgtcctg
accatccacaacatcgcctttcaggggctgttttcgcctgacctgatggcacccttgggc
cttgatgccgcgctctacacgcaggatgggatggagttttacggcaacctcggattcctg
aaggcgggtctggcctttgccgataaaatcaccaccgtcagcccaacctatgcgcgcgag
atcatgcaaccggaatttggcatggggcttgaggggttgctgcgcgcgcgggcacgtgat
gtcagcggtattctcaatggcattgatactgacgtctggaaccccgaaactgacccggct
ctgcccaagtcctattcactcaaggggttgaaagccaagcaacaatcccgacaggccgtg
ctggagcggttcggcctgacaccaccggataacgcgccgctgttttgcgtgatcagccgg
ttgaccacgcaaaaaggcgttgatgtgctgctggatgtggtgccggaccttgtggcgcgc
ggtgcggggctggctgtgctgggcagcggggatcgcgaccttgaggcggcatttgttgcc
gcagcacatcgctttcccggcgcggtgggtgtgatcatcggatatgacgaggacctgtcc
catttgatgcaggggggcagtgatgcaatcctgatcccgtcgcggtttgaaccctgcggc
ctgacgcagctttatgggttgcgctatggcaccataccggtggttgcgcgcaccgggggg
ctggccgatacgatcatcgatgccaacgaagccgcccttgccgccacctgcgccacgggt
gtgcaatttgcccctgtgacgccggatgcgctgtcccatgcgattgatcgttgttgcgat
cttttcgccgagcgcaagacgtggtcggggatgatgcgctgcgccatgcgtcaccccgtg
ggttgggagacgtcctccaaagcctatcttgaggtttacgatcgtcttctgggcggataa
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