Roseobacter denitrificans: RD1_2879
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Entry
RD1_2879 CDS
T00376
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00030
Pentose phosphate pathway
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RD1_2879 (edd)
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
RD1_2879 (edd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
McpB_HAMP_1st
Motif
Other DBs
NCBI-ProteinID:
ABG32405
RoseoBase:
RD1_2879
UniProt:
Q165D8
LinkDB
All DBs
Position
complement(2755689..2757494)
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AA seq
601 aa
AA seq
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MPLNETIDRVTRRIIERSKGPRGEYLDRMNAARVKGPARAHLSCSGQAHAYAGAGQDQAK
LAHETAGNLGIVTTYNDMLSAHQPFERFPDLIREAAREAGGTAQVAGGVPAMCDGVTQGE
PGMELSLFSRDVIAMATSVAMSHNTFDAAVYLGVCDKIVPGLVIAAQTFGHVPTVFLPAG
PMTSGLSNDEKSTVRQKFAAGEVGRAELMKAEMGAYHGPGTCTFYGTANTNQMLMEFMGL
HLPGTSFVTPNTGLRDALTKAGAQRALALSDLGDSYTPVCDILTEKAFVNGIVGLNATGG
STNLLIHLVAMARAGGIILDWQDFSDISDVTPLLARVYPNGLADVNHFHAAGGLGYMIRE
LLGAGLLHGDTKTVAGGGLELYTQEPKLIEGEVVWEQGTTESLNMKIVRPAADPFQATGG
LKRLSGSLGNAVIKASAVKPEHQIVEAPVRVFHDQETVKNACRAGEITQDTVIVVRFQGP
KANGMPELHSLTPALKNLQAKGLNVALVTDGRMSGASGSVPAAIHVSPEALDGGAIAKLR
DGDIVRVDAIAGVLEILTDGVLDRAVAQADLSANEFGLGRELFANFRRQVGSADTGACAL
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaacgagacgattgatcgcgtcacccggcgcattatcgaacgcagcaaaggc
ccccgtggagagtatctggaccgtatgaacgccgcacgggtcaagggcccggcgcgcgca
catctgagctgtagcggtcaggcgcatgcctatgcgggcgcgggacaggatcaggccaag
ctggcccatgaaacggcgggcaatctggggatcgtcaccacctataatgacatgctttcc
gcgcatcagcctttcgagcgttttcccgatctgatccgcgaagccgcgcgcgaggcaggc
gggaccgcacaggtggcaggcggtgttccggccatgtgtgacggcgtgacacagggcgag
ccgggcatggaactcagcctgttttcgcgcgatgttattgccatggcgacctctgtcgcg
atgagccacaacacctttgatgcggcggtctatctgggtgtctgtgacaaaatcgtgccc
ggtcttgtgatcgcggcgcagaccttcggtcacgtgcccaccgtgttcctgccagcgggt
cccatgacctcgggtctgtccaatgacgaaaaaagcaccgtgcgtcagaaatttgctgcc
ggggaagtgggccgcgcggaattaatgaaagccgagatgggcgcctatcacgggccgggc
acctgcacattctacggcacggccaataccaaccagatgctgatggaattcatggggctg
catttgccgggcaccagctttgtgacaccgaatacaggcctgcgcgatgcgctgaccaaa
gcgggtgcacagcgtgcgctggctctgtctgatctgggcgacagctacacgccggtctgc
gatatcctgacggaaaaggccttcgtcaatggtatcgtcgggttgaatgcaaccggcggt
tcgaccaatctgctgatccacctggtggcgatggcccgggccggtgggatcattctggac
tggcaggatttttcggatatttcggatgtgacgccgctgctggcacgggtgtatcccaac
ggtctggcggatgtgaaccatttccatgcggcgggggggctcggctacatgatccgcgaa
ctactcggggccggattgctgcacggcgatacaaaaaccgtcgcgggcggcgggctggag
ctttacacgcaggagccaaagctgatcgagggcgaggtcgtctgggaacagggaaccacc
gaaagcctgaacatgaagatcgtgcgccctgcagcggacccgtttcaggcgacaggaggt
ctcaaacggctgtccggctccttgggcaatgcggtgatcaaggcgtcggcggtcaaaccg
gaacaccagattgtcgaggcaccggtgcgcgtcttccatgatcaggagacggtcaagaat
gcctgccgggcgggtgaaatcacgcaggataccgtgattgtcgtgcgctttcagggaccc
aaggccaatggcatgcccgaattgcacagcctgacgcccgccttgaaaaacctgcaggcc
aaagggctgaacgtggctcttgttacggatgggcggatgtccggtgcctcgggctccgtg
cctgcggcgatccacgtcagccccgaggcgctggatggcggcgcgattgcgaagctgcgc
gacggggatattgtgcgcgtggatgcgattgccggagtgcttgaaatcctgacggatggc
gtgttggatcgggcggttgcacaggctgatctgtcggcgaatgaattcggtctcgggcgc
gagttgtttgccaatttccgccgccaggtgggatcggcagataccggtgcctgcgcgctg
ttctag
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