Roseobacter denitrificans: RD1_2895
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Entry
RD1_2895 CDS
T00376
Symbol
fdhI
Name
(GenBank) formate dehydrogenase, gamma subunit, putative
KO
K00127
formate dehydrogenase subunit gamma
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_2895 (fdhI)
09102 Energy metabolism
00680 Methane metabolism
RD1_2895 (fdhI)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ni_hydr_CYTB
Motif
Other DBs
NCBI-ProteinID:
ABG32419
RoseoBase:
RD1_2895
UniProt:
Q165C4
LinkDB
All DBs
Position
complement(2774151..2775341)
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AA seq
396 aa
AA seq
DB search
MLRQIYALLITFSLCFPAFAQEAPVGETDRSATGGATTLEDIMKRQEGLKVGNEFRSGLT
GNPAAAKPTTEQLGTLGGASDPDLWRALRFDSADITTQIQHPAATVLIQDTGMWWLQFRE
GPLTTYGFGLILVTMGALVLFYLIRGRIRIDGERTGRTILRFKSIERFAHWLLAGSFILL
GLTGVISLLGRQFLIPALGPEAFSTIAIGAKWIHNNVSWAFMLAIVMIFFLWVVHNLPHR
SDIYWLRKGGGIFGGGHPPAKKFNAGQKFIFWSVIVLGGSISASGLSLLFPFELPMFAAT
FAKLNDFGIPQLIGLGELNTDLAPHTEMQYAQLWHSIVSFILFAIVIAHIYIGSVGMEGA
YDAMGSGEVEEQWAREHHSLWVEEVKAKEAQAGRPS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcagatctacgctttgttgattactttttccctgtgctttcctgcctttgca
caggaagcacctgttggcgaaaccgaccgctccgcgaccgggggggcgacaacgctcgaa
gacatcatgaagcgccaggaaggtctcaaggtcgggaatgaattccgaagcggcctgacc
gggaaccccgccgcggcaaaaccaacgacagagcaactgggcacgcttggcggcgcgtct
gacccggacctgtggcgcgcgctgcgctttgacagcgcggatattaccacgcagatacaa
caccccgcagcaacggttctcatccaggatacgggcatgtggtggttgcagttccgcgaa
gggccgctgacgacctatggcttcggcctgatcctggttacgatgggcgcgctggtgctg
ttctacctgatccgcgggcgcatccgcattgacggggaaagaaccggcaggacgatcctg
cgcttcaaatccattgaacgcttcgcccattggctcttggccgggtcgtttattctgctg
ggtcttacaggggtcatatcgctattgggtcgccaattcctgatccctgccttggggccg
gaggcgttctcgaccatcgcgattggcgccaagtggatacataacaacgtgtcatgggcg
ttcatgctggccatcgtcatgatttttttcctctgggtcgtgcacaacctgccgcaccgc
tctgacatctactggctgcgcaaggggggcggtatcttcggcggggggcacccgccggcc
aagaagttcaacgccggtcagaagttcatcttctggtccgtgatcgttctggggggctct
atctcggcctctggtttgtctttgttgttcccgttcgaactgcccatgtttgccgcgaca
tttgccaagctgaacgattttggcatcccccagttgatcgggttgggcgaattgaacaca
gacctcgcgccgcatacggaaatgcaatatgcgcagctctggcattcgatcgtcagcttc
atcctctttgcgattgtgattgcgcatatctatatcgggtcggtcggcatggagggtgcc
tatgacgccatgggatcgggcgaagtcgaagagcaatgggcgcgcgagcaccacagcctt
tgggtcgaagaggtcaaagccaaggaagcgcaagcggggaggccatcatga
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