Roseobacter denitrificans: RD1_2896
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Entry
RD1_2896 CDS
T00376
Symbol
fdhB
Name
(GenBank) formate dehydrogenase Fe-S subunit
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_2896 (fdhB)
09102 Energy metabolism
00680 Methane metabolism
RD1_2896 (fdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Fer4_7
Fer4
Fer4_6
Fer4_10
Fer4_2
Fer4_9
Fer4_21
Fer4_4
Fer4_16
Fer4_8
Fer4_3
Fer4_13
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
ABG32420
RoseoBase:
RD1_2896
UniProt:
Q165C3
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Position
complement(2775421..2776017)
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AA seq
198 aa
AA seq
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MAARAKFLVDAERCIECNACVTACKNEHEVPWGINRRKVVTLNDGKPGERSISVACMHCS
DAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQFPQAGNFGSRGKMDKC
TFCAGGPEENHSTAEFQKYGRNRIAEGKLPICAEMCATKALLAGDGDVVAGIYRERVVAR
GFGSGAWGWGTAYDQKGG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggccgctagagcaaaatttctcgtcgacgctgaacgctgcattgagtgcaacgcctgt
gtcaccgcctgtaagaacgagcacgaagtgccgtggggcatcaaccgccggaaggtcgtc
accctgaatgacggcaagccgggtgaacggtcgatctccgtcgcctgcatgcactgttca
gacgcgccttgcatggccgtctgtccggtggattgtttctaccagaacgaagagggcgtg
gtcctgcactccaaggacctgtgcatcggctgcgggtactgcttttatgcatgccccttc
ggcgcaccccagttcccgcaggcgggcaacttcggatcccgtggcaagatggacaaatgt
accttctgcgcaggcggtcccgaagaaaaccactccaccgccgaattccagaagtatggc
cgcaaccggatcgcggaaggcaagctgccgatctgcgccgagatgtgcgccaccaaggcg
cttctggccggtgatggcgacgttgtcgcgggcatctaccgcgagcgcgtcgtggcgcgt
ggctttggctccggcgcatggggctggggcacggcatacgaccaaaaaggcggctga
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