Roseobacter denitrificans: RD1_2897
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Entry
RD1_2897 CDS
T00376
Symbol
fdhA
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_2897 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
RD1_2897 (fdhA)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RD1_2897 (fdhA)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PA-IL
Motif
Other DBs
NCBI-ProteinID:
ABG32421
RoseoBase:
RD1_2897
UniProt:
Q165C2
LinkDB
All DBs
Position
complement(2776033..2778915)
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AA seq
960 aa
AA seq
DB search
MLRKKTNSVGQRAGRTSILAEGKSTSVDRRAFLRGSGLAIGGLAAISATGGSVTQASAAA
SVTGAVELKKSVCTHCSVGCTVIAEVANGVWTGQEPGWDSPFNLGAHCAKGAAVREHAHG
ERRLKYPMKKENGEWVKISWDQAINEIGDGMLKIREESGPDSVYWLGSAKHNNEQAYLFR
KFAAYWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSYNDMHNSRAMFLIGGNPAEAHP
VSLLHMLKAKEQNNAPLIVCDPRFTRTAAHADEYVRFRPGSDVALVWGILYHIFENGWED
KEFIRTRVWGMDEIKKEVAKWNPEEVERVTGAPGSQLKRVARTLANNRPGTVIWCMGGTQ
HTNGNNNTRAYCILQLALGNMGTAGGGTNIFRGHDNVQGATDLGVLANTLPGYYGLSDGA
WAHWARVWNEDLDWLKGRFSDAEFDGKKMMNQTGIPVSRWIDGVLEDPENMDQPDNTRAM
VLWGHAPNSQTRMKEMKTAMEKLDMLVVVDPFPTVSAVLQDRQDGVYLLPAATQFETRGS
VTASNRSIQWREKIMEPLFESKTDHEIIAMFSEKFGFKDRIFRNIGFEGSEPVIEDITRE
FNSGMWTIGYTGQSPERLKLHMANQHTFDRTTLRAVGGPADGDFYGMPWPCWGTPEMNHP
GTANLYDMSIPVAEGGLAFRARFGVERDGDNLLAEGVSNPGAEIQDGYPEFTMQMLMDLG
WDGDLTADERAAIDAVAGPKTNWKTDLSGGIQRVAIKHGCAPFGNAKARAVVWTFPDPVP
IHREALYTNRRDLVADYPTYEDKKFWRLPTMYKSIQDQDFSKEYPMVLTSGRLVEYEGGG
DETRSNPWLAELQQDMFVEVNTRDANNLGIRDGADVWVEGPEGGKVKVKALITERVESGV
AFMPFHFGGHLEGVDLRDKYPEGADPYVLGESTNTAQTYGYDSVTQMQETKATLCKIWAA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggaaaaagaccaattcggtcggacagcgggcgggacgcacaagcatcctcgcc
gagggaaaatcaacatcagtagatcgtcgcgcgttcctgcgtggatccggcctcgccatc
ggtggtctggctgccatatccgcgaccggcggatctgtcactcaggcctctgcggcagca
agtgtcacgggcgcggttgagctgaagaaatcggtatgcacgcactgctctgtcggatgc
acggtgatcgccgaagtcgcaaatggtgtctggacagggcaggagcccggctgggacagc
ccgttcaacctgggtgcccattgcgccaagggggccgcggttcgcgagcacgcccatggt
gagcgtcgcctgaagtatccgatgaagaaagagaatggcgagtgggtcaagatctcctgg
gatcaggcgatcaacgagatcggcgatggcatgttgaaaatccgcgaggaaagcggaccg
gattctgtctattggctgggctctgccaagcacaacaacgaacaggcctatctgttccgc
aagtttgccgcctattggggtaccaataacgtcgaccatcaggcgcggatctgtcactcg
accaccgttgcgggtgtggcgaacacatggggctacggtgccatgaccaacagctacaac
gacatgcataactcgcgcgcgatgttccttattgggggcaaccctgccgaagcgcacccg
gtgtcgctgctgcacatgctgaaagccaaagagcagaacaacgcgccgttgatcgtgtgc
gatccccgctttacgcgcacggcggcccatgcggatgaatatgtccgcttccgtccggga
tcggacgtggcgctggtctggggtatcctctaccacatctttgaaaacggttgggaggac
aaggaattcatccgcacccgcgtctggggcatggatgagatcaagaaagaagtcgccaag
tggaaccccgaagaggttgagcgcgtcaccggtgcgcccggcagccagctcaagcgggtt
gcgcggacgctcgcgaacaaccgccccggcaccgtgatctggtgcatgggtggcacgcag
cacacaaacggcaataacaatacgcgggcgtattgcatcctccagttggcgcttggcaac
atgggcacagcgggtggtggtacgaacatcttccgcggccacgacaacgttcagggtgcc
acggacctcggtgttctcgcgaatacactgccgggctactatggtttgtccgatggggcc
tgggcgcattgggcgcgggtctggaatgaggatctggactggctcaagggtcgtttctcg
gatgccgagttcgacggcaagaagatgatgaaccagaccggtatccctgtgtcacgctgg
attgatggcgtgcttgaggatcccgagaacatggatcagccggacaacacccgcgccatg
gttctttggggccatgcgccgaactcccagacccgtatgaaagagatgaagacggcgatg
gagaagctcgacatgctggtcgtggtcgatccattcccgaccgtgtctgcggttttgcag
gaccgtcaggatggcgtctatctgctgcctgcggccacgcagtttgaaacgcgcggctct
gtcacagcctccaaccgctccatccagtggcgcgagaagatcatggagccactgtttgaa
tccaagacggatcacgagatcatcgcgatgttctcggagaagttcgggttcaaggaccgc
atcttccgcaacatcggttttgaaggcagtgaaccggtcatcgaggacatcacccgcgag
ttcaacagcggcatgtggaccatcggctataccggtcaaagcccggaacgcctcaaactg
catatggcgaaccagcatacctttgatcgcacaacgctgcgcgcggttggtgggccggca
gatggtgatttctacggcatgccatggccttgctggggcacgcccgagatgaaccacccg
gggacggcgaacctctatgatatgtccatcccggtggctgaaggcggtcttgccttccgc
gcgcgctttggcgtggagcgggacggggacaacctgctggcggaaggggtgtccaacccc
ggcgcggaaattcaggatggctatcccgagttcaccatgcagatgctgatggacctcggc
tgggacggtgatctgacggcagacgaacgtgccgcaattgatgccgtggcagggcccaag
accaactggaaaaccgacctttcgggcggcatccagcgggttgcgatcaagcatggctgt
gcgcccttcgggaacgccaaggcccgtgcggtcgtctggaccttcccggatccggtgcca
atccaccgcgaggcgctttatacgaaccgtcgcgatctggtggctgattatccgacctat
gaggataagaagttctggcgcctgccgaccatgtacaagtccattcaggatcaggatttc
tccaaggagtatccaatggtgctgacctccggtcgattggtcgaatacgaagggggcggt
gatgagacacggtcgaacccatggctggctgagcttcagcaggacatgttcgtcgaggtc
aacacgcgcgacgccaacaaccttggcattcgcgacggcgctgacgtttgggtcgaaggg
cccgaaggcggcaaggtcaaggtcaaggccctgatcactgagcgtgtcgaatccggcgtg
gcattcatgccattccactttggcgggcatctggaaggtgtcgatctgagggacaaatac
cccgaaggtgccgatccttacgtgttgggtgaatccaccaacaccgcacagacctatggc
tatgacagcgtaacccagatgcaagagacgaaagccactctttgcaaaatctgggcagca
taa
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