Roseobacter denitrificans: RD1_2952
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Entry
RD1_2952 CDS
T00376
Symbol
tgt
Name
(GenBank) queuine tRNA-ribosyltransferase
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_2952 (tgt)
Enzymes [BR:
rde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
RD1_2952 (tgt)
Transfer RNA biogenesis [BR:
rde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RD1_2952 (tgt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
Motif
Other DBs
NCBI-ProteinID:
ABG32473
RoseoBase:
RD1_2952
UniProt:
Q164X0
LinkDB
All DBs
Position
complement(2831666..2832850)
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AA seq
394 aa
AA seq
DB search
MGAAINQGLGTKGNLRQTDRMRFSFDLQATDGRARTGVISTPRGDIRTPAFMPVGTAATV
KAMLPASVRQTGADILLGNTYHLMLRPTAERIDRLGGLHRFMDWDGPILTDSGGFQVMSL
AALRKLTEEGVSFKSHIDGSRHMLTPERSMEIQRLLGSDIVMCFDECPALPADRAAIEKS
MQLSMRWAARSKDAFGDRPGHALFGIQQGGLEEDLRAESAAALREIEFDGYAVGGLAVGE
GQAAMFGCLDYAPEQLPRDKPRYLMGVGKPDDIVGAVARGIDMMDCVLPSRSGRTGQVFT
RRGVVNIKNARHADDPRPLDEQCSCPACRSYSRAYLHHVFRSQEIISSMLLTWHNLHYYQ
ELMAGMRSAIAQGTFDQWTSGFMAERALGDIEPI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagccattaatcaagggcttggaacgaagggaaatttgcggcaaacggaccgg
atgagattcagttttgacctacaggccacggatggccgcgcgcgcacaggcgtgatttcg
acgccgcggggcgacattcgcacgccggccttcatgcccgtgggcaccgccgcgaccgtc
aaggcaatgctgccggcgtcggtgcgccagaccggtgctgatatcctgctgggaaatacc
taccatttgatgctgcgcccgacggcggagcgcatcgaccggcttggcggtttgcacagg
ttcatggactgggacggcccgatcctgacggattcgggcgggtttcaggtcatgagcctc
gccgcgttgcgcaagctgaccgaagagggcgtgagtttcaaaagtcatatcgacggatca
cggcacatgctgacgcccgagcgatccatggaaatccagcgcctgctcggctctgacatc
gtcatgtgttttgacgagtgtcccgcactgcctgctgatcgcgcggccatcgaaaagagc
atgcaattgtcgatgcggtgggcagcgcggtccaaggacgcttttggtgaccggcctggc
cacgcgcttttcggtattcagcagggagggctggaagaagacctgcgcgcagaaagtgcg
gcagccctgcgcgagattgaatttgatggctacgccgtgggcgggcttgcggttggcgag
ggccaggcggcgatgtttggctgtctggactatgcgccggaacagttgccccgcgacaag
ccgcgatacctgatgggggtgggcaaaccggatgacattgtcggggccgtggcgcgtggc
attgatatgatggattgtgttctgcccagccgctccgggcgcacagggcaggtcttcacc
cgtcgcggtgttgtgaacatcaagaatgcgcgccatgcggatgatccaaggccgctggat
gagcagtgcagctgccccgcgtgccgcagctatagccgcgcctatctgcatcatgtgttc
cggtcgcaggaaatcatcagttcaatgcttttgacatggcataacctgcattattatcag
gagcttatggcgggcatgcggtctgcgatcgcgcaaggtacatttgatcaatggaccagc
ggtttcatggctgagcgtgctttgggcgatatcgaaccaatttag
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