Roseobacter denitrificans: RD1_3008
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Entry
RD1_3008 CDS
T00376
Symbol
pgk
Name
(GenBank) phosphoglycerate kinase
KO
K00927
phosphoglycerate kinase [EC:
2.7.2.3
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00010
Glycolysis / Gluconeogenesis
rde00710
Carbon fixation by Calvin cycle
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01230
Biosynthesis of amino acids
Module
rde_M00002
Glycolysis, core module involving three-carbon compounds
rde_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
rde_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RD1_3008 (pgk)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RD1_3008 (pgk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rde04147
]
RD1_3008 (pgk)
Enzymes [BR:
rde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.3 phosphoglycerate kinase
RD1_3008 (pgk)
Exosome [BR:
rde04147
]
Exosomal proteins
Proteins found in most exosomes
RD1_3008 (pgk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGK
DUF2514
Motif
Other DBs
NCBI-ProteinID:
ABG32526
RoseoBase:
RD1_3008
UniProt:
Q164R7
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All DBs
Position
2884976..2886163
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AA seq
395 aa
AA seq
DB search
MSWKTLDDMDVAGKRVLLRVDINVPVEEGQVTDRTRIDRIIPTLQDILAKGGTPIMLAHF
GRPKGKVVPEMSLRVTLPALEAALGRKVTFIEEPNAERLSDLPEGIVVLLENTRFAVGEE
ANDPEMARFLATLGDVFCNDAFSAAHRAHASTTGVAHLLPSCAGRLMQAELSALEAALST
PQRPVGAVVGGAKVSTKIALLENLVARLDVLVIGGGMANTFLAAQGAKLGASLMEPDYME
TARTIMQSAERAGCKLLLPVDGVVAREFKAGADFEVVALGKDTVLAEDQMVLDAGPQSVA
AVMAAFRTLKTLIWNGPLGAFEITPFNQATNATALEAARLTKSGALISVAGGGDTVAALN
QAGAAADFTYISTAGGAFLEWMEGKTLPGVAALQG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaagacattggatgatatggatgtggcgggcaagcgggtgctgctgcgtgtg
gatatcaacgtgccggtcgaggagggtcaggtcacggaccgaacgcggattgatcgcatc
attccgacgctgcaggatattctggccaagggcggcacgccgatcatgctggcgcatttc
gggcgtcccaaaggcaaggttgtgccggaaatgtcgctgcgcgtgaccctgcccgcgctt
gaggccgctttggggcgcaaggtcacattcatcgaagagcccaacgcggagcgcctgtct
gatttgccggaaggcatcgttgttctgctggaaaacacgcgctttgcagtgggcgaagag
gccaatgacccggaaatggcgcggtttctggccacgctcggcgatgtcttttgcaatgac
gccttttcagccgcccaccgtgcgcatgcctccaccacgggggttgcgcatctgttgccg
tcctgcgcgggccgcttgatgcaggcggagctttcggccttggaagcggccctgtcgacg
ccacaacgccccgtcggcgcggtggtgggcggggccaaggtttcgacgaaaatcgcactg
cttgaaaatctggttgcccgcctcgatgtgctcgtgatcgggggcggcatggccaacact
ttcctcgccgcacagggcgcgaaactgggcgcgtcgctgatggagccggattacatggaa
accgctcggacgatcatgcagtctgccgagcgtgcggggtgcaagctgctgctgccggtc
gacggggtcgtcgcgcgcgaattcaaggcgggtgcagactttgaggttgtcgccctgggt
aaggacacggttctggccgaggaccagatggttctggatgccggcccccaaagcgtggcg
gccgtcatggctgcgttcagaacgctcaagacactgatctggaacggcccgctgggcgca
tttgaaattacccccttcaatcaggccacaaatgccaccgctttggaggcggcgcggctg
accaaatcaggcgcgctgatctcagttgcgggcggcggtgatacggttgccgcactcaat
caggcgggtgccgccgcggatttcacgtatatttcaaccgccggtggcgcgtttctggaa
tggatggagggcaaaacccttcccggggtcgcggcactgcaaggctga
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