Roseobacter denitrificans: RD1_3035
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Entry
RD1_3035 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
RD1_3035
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RD1_3035
Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RD1_3035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
ABG32548
RoseoBase:
RD1_3035
UniProt:
Q164P5
LinkDB
All DBs
Position
complement(2905890..2907056)
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AA seq
388 aa
AA seq
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MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLED
SGAVTSSAIFRMGAEYADKADQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIG
VNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKASVGTRFRVALAEGVTSWQIV
EGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVL
GRGLRQSELRAATPWNTYVIEGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAF
AETLAEHNRNVAQWRRIEAERANQSSGN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggcatatcgcttctaatgcagtgacgatgttgattgtgctgctgtttctggtg
ggcggcgtcattctgtggggcaaatcccaatacgatggtgcgggcccactgagcgaagcg
atgtgtgtggaagtgcccagtggctcaacgatgcgccgcataagcgagacgctggaagac
agcggagccgtgacgtccagcgcgattttccggatgggcgcggaatacgccgataaagcc
gaccagttgaaggcgggcagctatctggtgccccccggtgcgtccatggcgcagatcgtg
gataccgtgacccggggcggggcgagcacctgcggaacggaagtcgtgtatcgcataggc
gtaaatcgcgtgagtgttcagttgcgcgagttgaacccgcaaaccaatcagttcgaagaa
atggcgaatttcaatcccgccgtggatgagacgcctgacatctatacagaccgcaaggca
tctgtggggacgcggtttcgtgtggcgctcgcggaaggtgtgacgtcctggcagatcgtt
gaggggctgaaggcgatggatgtgctggaggggagtgtcgaggcgctgccgcctgaaggg
tcgctggcacccgacagctatgaggtgcgcccgggcgatcagcgcgcaaatgtggtggaa
cgcatgcgcgccgcacaggaacggcgtgtggcgcgcgtctgggaaaaccggcagccgggt
ttgccgatcgagacaccggaagaattgttgatccttgcgtcgattattgaaaaggaaacg
gccgttgccgaagagcgtcggcaggtggcgagcgtctttgtgaaccgtctgaaccgtggc
atgcgtctgcagaccgaccccaccgtgatttatggtgtgaccgaagggagaggcgtgctg
ggacgcgggttgcgccagagtgaactgcgcgccgccaccccgtggaacacctatgtgatc
gaggggctgccgccgacgccgatcgccaatccgggtcttgcaagtctggaagcggcagcg
gcgccgctggagacgccctatatctttttcgtagcggacgggacgggcggtcacgccttt
gccgaaacgcttgcggagcataaccgaaacgtcgcacaatggcgccggatcgaagcggaa
cgggccaatcagagttctggcaactag
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