Roseobacter denitrificans: RD1_3078
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Entry
RD1_3078 CDS
T00376
Symbol
rbsC
Name
(GenBank) ribose ABC transporter, permease protein
KO
K10560
rhamnose transport system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3078 (rbsC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3078 (rbsC)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RD1_3078 (rbsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ABG32589
RoseoBase:
RD1_3078
UniProt:
Q164K4
LinkDB
All DBs
Position
complement(2949690..2950652)
Genome browser
AA seq
320 aa
AA seq
DB search
MRETILAAAIVVLLILIASRFSGFVAPSNLVNVFNDTAPLIILALGQMVVILTRCIDLSV
AANLALTGMAVAMINVAFPGLPIPFIIAIAICLGGAMGAINGLLVWKLAIPPIVVTLGTM
TIFRGIIFLISDGKWVNAHEMSEGFTGFPRAAVLGLPILSWCAVLSVIVFAVMMSRTALG
RSIFAVGGNPHAAVYTGIDVGKTQFKAFVISGALAGLTGYLWVARYAVAYVDIAGGFELE
VVAACVIGGISIAGGIGSVGGAVLGALFLGVVKNALPVVNISPFWQLAISGSAILIAVAF
NAQSGRKKGRLILKDAEATR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgaaaccattcttgccgcggcgattgtcgtgttgctgatcctgatcgcctcgcgg
ttttcaggttttgtcgccccctccaaccttgtgaacgtgttcaacgatacggcaccgctg
atcatccttgcgctgggtcagatggtggtcatcctcacccgctgtattgatctgtcggtc
gctgcgaacctcgccctcacggggatggccgtcgccatgatcaacgtcgcgtttcccggc
ctgccgatccctttcatcattgccatcgcgatctgccttggcggtgcgatgggggcgatc
aatggtctgctggtgtggaaactggcgatcccgcccatcgtcgtgacgctgggcacgatg
accatctttcgcggtatcattttcctgatttcggacggaaaatgggtcaacgcccatgag
atgagcgaagggttcacgggttttccacgcgccgctgtgcttggtttgcccattctgtca
tggtgtgccgttctgagcgtcatcgtctttgcggtaatgatgtcgcgcactgctctgggc
cggtcgatctttgcggtcggtggtaacccccacgcggcggtctatacagggattgatgtc
ggcaaaacgcagttcaaggcctttgtgatatccggcgcacttgcgggtcttacggggtat
ctttgggtggcgcggtatgccgtggcctatgtcgatatcgcaggcggattcgagctggaa
gttgtggccgcctgtgtcattggcggtatttccatcgccggtggcatagggtccgttggt
ggtgcggttctgggcgcgctgtttctgggggtcgtcaagaatgccttgcccgtcgtcaat
atctcacccttctggcaactggccatttccggcagcgcgatcctgattgcggtcgctttc
aacgcccaatccggccgcaagaaaggccgtctcatcctcaaggacgcggaggcgacccga
tga
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integrated database retrieval system
